Gene Sbal195_4366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4366 
Symbol 
ID5756197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5161023 
End bp5161529 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID641290722 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001556784 
Protein GI160877468 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGG TCAATATTTC TACTCCTATC AATAACCTAT ATAGAGATAA CCAGTTTTGG 
CTACGCGGCT GGCTATACTC ACGCGTGGGT TGTTCAGAAA CAGCGGCCGA CCTAGCCCAA
GATACATTTC TACGTTTGTT AAAAACCGGA AATTTACCGC CTTCAGGCGA ATCGCGGCGT
TTTTTAACCC GCATTGCCAA AGGATTGATG ATTGACGCTT ATCGTCGGCA GAAGATTGAA
GAAGCCTACC TAGAAAGTTT GAGCTTGATG CCAGAAACAT TCATTCCTGG GCCAGAAATC
CATCATGTCA TCATTGAAAC ACTCGCTGAA ATTGCCGTTA TGCTCGATAA CTTGCCGGAT
AATGTGCGCT TGACGCTGTT ACTGCGCCAG ATAGAGGGTT TAAGCTATGC CGACATTGCT
AAGCAGCTAT CAGTCTCTGT TTCATCGGTA GAAAAGTATG TTGCGCGAGG CTTAGCGGCC
TGCTGCCTCG CGCTGGAATC CTATTAG
 
Protein sequence
MMSVNISTPI NNLYRDNQFW LRGWLYSRVG CSETAADLAQ DTFLRLLKTG NLPPSGESRR 
FLTRIAKGLM IDAYRRQKIE EAYLESLSLM PETFIPGPEI HHVIIETLAE IAVMLDNLPD
NVRLTLLLRQ IEGLSYADIA KQLSVSVSSV EKYVARGLAA CCLALESY