Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4337 |
Symbol | |
ID | 5756168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 5122403 |
End bp | 5127292 |
Gene Length | 4890 bp |
Protein Length | 1629 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641290693 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001556755 |
Protein GI | 160877439 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3614] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.571014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.322198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACTTGT CCATGAGTTA TAAAAATGCT TCGAAATGGG GCTTATTAGT CCTGTTGATT GGATTGGTGC TAAGCGCGTT ATTAACAGGG TTGACGGGGC GCATGAACGC CCAAAAGATT GAGCAAGCCT TGCGCGAGGA CGCGGAGCAA ATCAGTGAGA ACGTGATTAA CCGTATCACC TTATATCAAT ATGGTTTACG CGGTGCACGC GGCACGATAG TCACTGCGGG TGAGCATGAT ATTAGTCGTG CTAGCTTCCA TCGTTATAGT TTAACGCGGG ATGTGGACCA TGAGTTTCCC GGCGCCCGTG GATTTGGCTT TATTCGTCGA GTACCCAGTC CCGATGAAGC GGCATTTATA GCAAGAGCTC GTCAAGATGA TTGGCCTGAT TTTAATATTC GCCAACTTAA CGCTCATGAT GGCGAAAGAT ACGTTATTGA ATATATTGAG CCAGTAGACC GCAATAAAGC TGCCGTTGGC TTAGATATTG CCTCAGAGGC ACATCGTAAA GCCGCTGCCG ATGCGGCTAT GTTATCCGGT GAAGTGCGCT TATCTGCACC CATCACATTA GTGCAGGCTA CGGGTAGGCC GCTACAATCA TTCTTAATTC TGCAGCCTAT TTATCGCACG GGTTTAGTAC CTAAAACACA ACAGGATAGA CTGTCAGCCG GGTATGGTTG GAGTTATGCC CCCTTAGTGA CGAACGAAGT TCTAATGGGG TTAGCGTTGA ATCAGAAGAT GACTAAGCTG TTGCTTAGCG ATATCACCCA AGCTGAGCGT CCCATCAGTT TTTTTGAAAC ACACCCTGAT GAGGCGTCTC CACTATCTGC ATATCGCCAT AAAATGACGA AAGACATTTT TGGTCGTAAA TGGCAGATAG AAGTTATCGC TTATCCATCC TTTATTAAGT CATTGCATCT TAATCAACCC AGTTTAGTGC TGTTGAGTGG CAGTTTGTTT AGCCTGCTTT TAGCTGCGTT AATTGCCATG TGGTCCATCA GTTTGCAGCG TAAGCAGCAG GTGCTGCTTG AACAGGCTAG GCGCGCCAGC ATGCTGGAGC ATTCTCTCGA TGGCATTATC AGTTATGACA CTAAAGGCCA AATTACCAGT TGGAACCAAG GTGCGGAGCA GCTATTTGGC TATACCGAGG CGCACGCTCT TGGCCAGTCA TGTTGTAAAT TGATTGTTCC TGCCAGCATA GTGCAGGAAG AAAGGGCATT ATTCGCCGAA GTGTTAGCGG GTAAAACCTC TTTAAATCGG ATAACTAGCC ATCAACGACA GGATGGTAGC CATTTATCGA CCTCGACTAC AGCCGTACCT ATTTACGACG AGCACGGCAA GATTGCTGGC ATGAGCCAAA CGATCCGCGA TATTACGGCG CAGCTAGAAG CGGAACGACA TATTTTAAGC TTGAATGCGA GTCTCGAACG GCAAGTCACC AAACGTACCC ATGCGTTGCA GCAGGCGTTA CTCGAAAACC AAACCTTGCT CGACACTATT AATCAACAGC TACTCTATTC CGTTACTGAC CCCAATGGCG TCATCTTAGA GGTGAATGAT AACTTTTGCC GTATTAGTGG CTATCCGCGT GAGCAACTGG TGGGGAAAAC CCATGCAATA CTTCAGTCAG GTGAACATGA TGCATCTTTC TGGCAATCGA TGTGGCAACA GATAAACGCG GGACAGTCTT GGCACGGTGA AATCTGCAAC CTTGATAAGC ATCAAACGTT GAAATGGTTC GATACTGTGA TTGGTCCAGT ATTTGATGAA TACGGTAAAA TTGAACGTTT TGTGGCATTA AGGATTGATA TTACCGACCG TAAGTTGACA CAGATTGAGA AAAATAACTT AGGGTCATTA CTGACTAACG TGCTCGATGC CGCCTCTGAA ATGTCCATCA TAGCCACTGA TGTACAAGGG AATATCACCA TTTTTAACCG TGGAGCAGAG CGCTTACTCG GTTATTCAGC CGAGGAAATG ATAGGTCAAT CTACCCCTGC GCCTCTGCAT TTGCTCGAGG AGGTGATGAT AAGGTCTGCA GAGTTATCTG CTGAATATGG TAAAGACATT CAAGGCTTTG ATGTTTTCAT CTATAAGGCA AGAGCCGAAG GTTCGGAAAC CCGCAATTGG ACCTATGTGC GTAAAGACGG TAGCCAGTTT CAAGTGTCAC TTTCTGTCAC TGCGATGCGG GACAGTGTTG GCGAGATTAT TGGTTATTTA GGCATTGGCG TCGATATTTC ACTGATGTTA CTGCAGCAAC AAGCACTGAT GACGGCCAGT AACCATTTAA GTAAGGCCGC CGAAGTGGCT CAGTTAGGTA TCTGGACTTG GAATCTGCTC GGTAATTCGC TTGAATGGAA TGAACGTATG TTTGCGATTT ACGATCAGCC TGAAAGTCTT CGTGAACAAG GATTAACCTA TGAGCACTGG TCGATGCGGG TCCATCCTGA CGATATTGCT TTTGCTGATG CTAAATTGAA AGGCGCTGTT GAAGGAACGG CGAAATATGA CCCTATTTTT AGGGTGGTAA GGACAGATGG CTCGATTCGC TTCGTTCAGG CAGCCGCCCA AGTAGAGCGC GATAAACAGG GTCATGCGAT TAGAGTGATT GGGATTAATT TAGATATCAC TGAACAGCAA CAATTGGAAG AAAGCTTGCG AGAAGCTAAG CAGGAGGCCG ATGCGGCGAG TGCGGCTAAG TCTGCATTTT TAGCCAATAT GAGCCATGAA ATTCGCACCC CAATGAATGC CGTATTAGGC ATGCTGCAAT TAATTCAATA CACCTCTTTG TCTAGGCAGC AGCAAGATTA TGTTAATAAA ACTCAAACGG CCGCTAAGTC CTTATTAGGA CTGCTGAACG ACATTCTCGA CTTTTCTAAA ATTGATGTTG GCAAGTTAAT ACTCGATCTT CATCCCTGTT CGATTGAATT GCTGATGCGG GATCTTGCCG TTGTACTGTC GGGTAACCAT GGTGATAAAG ATGTCGAGGT GATGTTTGAT CTCGACACGG CTTTACCTCC TTGGCTGTTA GCAGATCAAC TTAGATTGCA ACAGATCCTC GTTAACCTCG CGGGTAATGC CCTTAAATTC ACTCACCACG GTCAAGTGAT TGTCGGCATT GAATGTTTAC GCCATGAGGC AGATACAGTC ACAGTACAAA TTTCAATTAC CGATACGGGT ATTGGTATCA GTGATGAGCA GATTGAGCGG ATTTTTACCG GATTTGAACA GGCAGAATCC TCAACATCAC GCCGCTTTGG GGGCACAGGG CTCGGGCTAG CAATAAGCAA AAGGCTTATC GGCCTTATGG GCAGTGAGTT ACATGTGACC AGCAAGGTGG GTGTTGGAAG CCGTTTCTGG TTTGATATGA CGTTTCCTAT CATACAAGTC GAAGAAACTC GGCATACAGA CCTTAGCGGA TACCGTGTGT TAGTGGTTGA TGATAATGAA TTGACGACGG AGATTTTAGA GAAAATTTTG ACCGGATTTG GGTGTGAGGT TGAAACTGCC TTAGGTGGAT ATGCGGCTCT CGCGAAGGTT AAACAATCAC ATGAAAAATC GACACCGTTT GATGTGGTGT TGATGGATTG GCGTATGCCA GACCTTGATG GGTTACAAAC CGCCGAAATG CTGCGTAACT CAGACGCGAA TAACCAGACT CCGCTGGTGG TGATGTTAAC GGCCTACGGC CATGAAGTGA TTGCCGAGAG TCAGCAAATT AGACATGTCC CTTTCGTTAA TTTCCTCACT AAACCTGTGA CATCGCAGAT CTTGGCTGAA GCTGTGTTAA ATGCCATCGA AGGTAAGACA ATGGAGGCGC ACCCTCAGCC GCGTTCACAG CGATTTTTAG CAGGGCTAAC CATATTAGTG GTGGAAGATA ATCAACTCAA TCGACAAGTT ATCGATGAGC TATTGAGTTA TGAGGGCGCG AATGTCGTAT TGGCAGAAGG CGGCATGGAA GGTGTTTCCT TGGTGCTCGA GAGTGGTGAC TTATTCGATA TTGTCATCAT GGACATGCAA ATGCCCGATA TGGATGGATT GGAGGCGACT CGACGTATCC GAGCTGATGA ACGTTTCGCA GCATTACCGA TACTTGCGAT GACAGCTAAT GCTTCACAGT CCGATAGGCA AGAGTGTCTC AATGCGGGTA TGAATGACCA TGTTGGCAAA CCCATCGATA TGCCATTATT ACTACCGAGT ATTTTGCGCT TAGTTGGCCG TGAGGATATG ACCTCTGCTG AATTTGAAGG GCACTGGCCT GAAGCGACGC AGGAGCAGAG TGATGAGCAA TTACTCGATG ATATTCGCCT GATCCTGCGT CGTTTTGGGG GGAATCAGTC TTTCTTCCAA AAAATGGCCA AAAGTTTTGC GCCTGAAATG ATGAAGCAAC TCGCGCTCTT TAAGCAGTCG ACTAAGATAT TTGATCACTC AACGGCGGCG GCGATTAGCC ATGGTATTAA AGGCATTGCC AGTAATTTTG GTGCTCGGCG TTTAGCTGCG CATGCGGCTT ACTTAGAGAA ACAGTTTAAG CAAGAATGCC CTGAACTGAT TGATATTAAG CGCTGGACGG ATACGTTAGA GGTACTCATT AATCAGAGTA GTCAGCAGCT TTCAACCTAC TTTGAGGTGG AAGAATTTAA TGCAGTTATT AGCGATAATG TAGAAAAAGC CGTGTATTCT TCGGTATCGG TGCAAAGTGT TAAGACGGAC CTTAATACCC TAATGAACCT ATTAAAAGAG AACAATTTAG AGGCTATGGC CTTAACTGAC CAGTTAGCCG AATTGTTATC AGGCCATCCA CAATGGTCCA TATTGCATGG GCAAGTGCAA GCGCTCGATT TTAATCAGGC ATTAGATACG CTACGGATTA TCATGTTGGA GGAGGCGTAA
|
Protein sequence | MHLSMSYKNA SKWGLLVLLI GLVLSALLTG LTGRMNAQKI EQALREDAEQ ISENVINRIT LYQYGLRGAR GTIVTAGEHD ISRASFHRYS LTRDVDHEFP GARGFGFIRR VPSPDEAAFI ARARQDDWPD FNIRQLNAHD GERYVIEYIE PVDRNKAAVG LDIASEAHRK AAADAAMLSG EVRLSAPITL VQATGRPLQS FLILQPIYRT GLVPKTQQDR LSAGYGWSYA PLVTNEVLMG LALNQKMTKL LLSDITQAER PISFFETHPD EASPLSAYRH KMTKDIFGRK WQIEVIAYPS FIKSLHLNQP SLVLLSGSLF SLLLAALIAM WSISLQRKQQ VLLEQARRAS MLEHSLDGII SYDTKGQITS WNQGAEQLFG YTEAHALGQS CCKLIVPASI VQEERALFAE VLAGKTSLNR ITSHQRQDGS HLSTSTTAVP IYDEHGKIAG MSQTIRDITA QLEAERHILS LNASLERQVT KRTHALQQAL LENQTLLDTI NQQLLYSVTD PNGVILEVND NFCRISGYPR EQLVGKTHAI LQSGEHDASF WQSMWQQINA GQSWHGEICN LDKHQTLKWF DTVIGPVFDE YGKIERFVAL RIDITDRKLT QIEKNNLGSL LTNVLDAASE MSIIATDVQG NITIFNRGAE RLLGYSAEEM IGQSTPAPLH LLEEVMIRSA ELSAEYGKDI QGFDVFIYKA RAEGSETRNW TYVRKDGSQF QVSLSVTAMR DSVGEIIGYL GIGVDISLML LQQQALMTAS NHLSKAAEVA QLGIWTWNLL GNSLEWNERM FAIYDQPESL REQGLTYEHW SMRVHPDDIA FADAKLKGAV EGTAKYDPIF RVVRTDGSIR FVQAAAQVER DKQGHAIRVI GINLDITEQQ QLEESLREAK QEADAASAAK SAFLANMSHE IRTPMNAVLG MLQLIQYTSL SRQQQDYVNK TQTAAKSLLG LLNDILDFSK IDVGKLILDL HPCSIELLMR DLAVVLSGNH GDKDVEVMFD LDTALPPWLL ADQLRLQQIL VNLAGNALKF THHGQVIVGI ECLRHEADTV TVQISITDTG IGISDEQIER IFTGFEQAES STSRRFGGTG LGLAISKRLI GLMGSELHVT SKVGVGSRFW FDMTFPIIQV EETRHTDLSG YRVLVVDDNE LTTEILEKIL TGFGCEVETA LGGYAALAKV KQSHEKSTPF DVVLMDWRMP DLDGLQTAEM LRNSDANNQT PLVVMLTAYG HEVIAESQQI RHVPFVNFLT KPVTSQILAE AVLNAIEGKT MEAHPQPRSQ RFLAGLTILV VEDNQLNRQV IDELLSYEGA NVVLAEGGME GVSLVLESGD LFDIVIMDMQ MPDMDGLEAT RRIRADERFA ALPILAMTAN ASQSDRQECL NAGMNDHVGK PIDMPLLLPS ILRLVGREDM TSAEFEGHWP EATQEQSDEQ LLDDIRLILR RFGGNQSFFQ KMAKSFAPEM MKQLALFKQS TKIFDHSTAA AISHGIKGIA SNFGARRLAA HAAYLEKQFK QECPELIDIK RWTDTLEVLI NQSSQQLSTY FEVEEFNAVI SDNVEKAVYS SVSVQSVKTD LNTLMNLLKE NNLEAMALTD QLAELLSGHP QWSILHGQVQ ALDFNQALDT LRIIMLEEA
|
| |