Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4176 |
Symbol | |
ID | 5756003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4941407 |
End bp | 4942405 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641290529 |
Product | LacI family transcription regulator |
Protein accession | YP_001556595 |
Protein GI | 160877279 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA AGCGTAGACC CACTCTTCAA GACGTTGCCG ATCAAGTTGG GATCACCAAA ATGACGGTGA GCCGCTATTT AAAAAATCCA ACAAGGGTGG CGCAAAGCAC TCAAGAAAAG ATAGCTATCG CGCTAGAAAC CTTAGGTTAT ATACCTAATC GCGCGCCGGA AATTTTGGCG CAAGCAACCA GCCGCGCCAT TGGCGTGTTA GTGCCGTCGT TAACCAACCA AGTGTTTGCC GAAGTGCTGC GCGGTATCGA GAATGTGACT GGAAAACGCG GTTATCAAAC CATGCTGGCT CACTACGGAT ATCAGGCAGA ATTAGAAGAG GAGCGGGTGG CATCACTGCT TTCTTACAAT ATTGATGGCT TACTTTTATC CGAAAGTTAC CACACGCCGC GTACCGTGCG AATGATTGAA ACGGCGGGCA TTCCGGTCAT TGAAATGATG GATAGTGTGT CGCCTTCAAT TCAACAGTGT GTGGGGTTCG ATAACACAGC TGCCGCATAC GAAATGGTTA AGGCCATGAT TGCACAAGGC TATCGCCACA TTGCTTACTT AGGCGCGCGC ATGGATATTC GCACTCAGCT TAAGATGCGA GGCTACGAGT TAGCGATGCA GGAAGCCAAG CTCACACCTT TGGCAATGAC CACCAATGAG GCCTCATCGT TTTCCTTGGG GGCGTCGTTA TTGCAACAAA CCTTAGCGAA ATATCCCTAT GTGGATAGCT TTTTCTGCAC TAACGATGAT TTGGCTGCGG GGGTGATATT TGAGTGTCAA AGACAAGGCA TTAAGATCCC AGAACAAATA GGCGTTGCAG GGTTTCATGG CCATGATATT GGGCAATCCA TGACGCCAAA ATTGGCGAGC ATTATTACCC CGAGAAAGGA GATTGGCCGA ATTGCTGCCA CTGAGTTATT AGACCGATTA AATGGCAAAG AGATAGCAGA ATCGGTTATC GATCTGGGTT ATCGCATTGA TTTAGGGGAA ACATTGTAG
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Protein sequence | MNKKRRPTLQ DVADQVGITK MTVSRYLKNP TRVAQSTQEK IAIALETLGY IPNRAPEILA QATSRAIGVL VPSLTNQVFA EVLRGIENVT GKRGYQTMLA HYGYQAELEE ERVASLLSYN IDGLLLSESY HTPRTVRMIE TAGIPVIEMM DSVSPSIQQC VGFDNTAAAY EMVKAMIAQG YRHIAYLGAR MDIRTQLKMR GYELAMQEAK LTPLAMTTNE ASSFSLGASL LQQTLAKYPY VDSFFCTNDD LAAGVIFECQ RQGIKIPEQI GVAGFHGHDI GQSMTPKLAS IITPRKEIGR IAATELLDRL NGKEIAESVI DLGYRIDLGE TL
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