Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4173 |
Symbol | |
ID | 5756000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4937743 |
End bp | 4938897 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641290526 |
Product | porin |
Protein accession | YP_001556592 |
Protein GI | 160877276 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA CTTGTCTCGC CTTAGCGTTA CCTATGCTAT TAACGGCCAC CAGCAGTCAG GCGGTTGAGC TCTATAAAGA TCAAAAAAAC ACATTAGATT TAACCGGTTG GTTGGGGTTT GCCGCCTTGA ATGACAGCCA CGACACCTCG GTTATCGACG ATTCATCACG CTTAAGATTT AGCTTCGAGC GCAGTGAGAG AAACGGCTGG ACCGCCTTCG CCACCACAGA ATGGGGGATC AATATGGTCT CCAGCGACGA TGGCCTAGTG ATGCAAGGGG GCAAACTCGC TGCCGAAAAG ACCGATGATT TTCTCTATAA CCGCTTAGGT TATGTCGGCA TGTCCCACGA TGTCTGGGGG AGTTTGAGCT TTGGTAAACA ATGGGGCGCC TATTACGATG TCGCCGGCAC CACAGATTTA CCCAACGTTT TCGCAGGCTA CAGCGTTGGC GCTTACACCT TTGGCGATGG CGGCCTCACC GGCACTGGCC GTGCCGACTC CGCCTTTATT TACCGCAATA GTGTCGGCCC CGTGCAAATC GCCTTGCAAT ATGCCGCCAA AACCAATGGC GATGTCAGCT TAAAAAATGA TGACGGCAGC GAAATGAGTA ACTCTGAGCT GAGTTTCGAC AGCAGTTACG GTGCCAGTAT CACCTATTCA GCAACCGAAA AATTCAAGCT GCTTGCAGGC TTTAACCGCG GTGATTTTGA AGGCCACTTA GGCAATACTC AAGTCGACGA AACCAATGAA ATCATCGGCA TTGGTGCCAT GTATGGTGAC TACTACCACT ATGCCGAAGG ACGCGAAGCC AGCGGTCTTT ATGTGGGTTT TAACGCTCAC CAAAGTAAGA GTAATGAACT GGTCAATGGT GATCTCTACG ACGCCACTGG TGCCGAGTTG ATGACGGCCT ATCAATTCGA CAACGGTTTT GTGCCTATGG TCGTACTCAG TTATTTAGAT TTAGACACAG ATGCAACTAC GCCCATCCAA GGTAATTGGA CCCGCCAATT TGCCATGCTG GGTCTGCACT ATCGCTATAG CAACGACACT GTGATGTTTG CTGAAATGAA GTTAGATTTC AGTGATATGG ATGATACCGC GCTCGAGGCC CAGGAAGACA ACAGCTTCGC AGTCGGGATT AATTACTTCT TTTAA
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Protein sequence | MNKTCLALAL PMLLTATSSQ AVELYKDQKN TLDLTGWLGF AALNDSHDTS VIDDSSRLRF SFERSERNGW TAFATTEWGI NMVSSDDGLV MQGGKLAAEK TDDFLYNRLG YVGMSHDVWG SLSFGKQWGA YYDVAGTTDL PNVFAGYSVG AYTFGDGGLT GTGRADSAFI YRNSVGPVQI ALQYAAKTNG DVSLKNDDGS EMSNSELSFD SSYGASITYS ATEKFKLLAG FNRGDFEGHL GNTQVDETNE IIGIGAMYGD YYHYAEGREA SGLYVGFNAH QSKSNELVNG DLYDATGAEL MTAYQFDNGF VPMVVLSYLD LDTDATTPIQ GNWTRQFAML GLHYRYSNDT VMFAEMKLDF SDMDDTALEA QEDNSFAVGI NYFF
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