| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4145 |
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| Symbol | |
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| ID | 5755972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4908700 |
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| End bp | 4913226 |
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| Gene Length | 4527 bp |
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| Protein Length | 1508 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290498 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001556564 |
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| Protein GI | 160877248 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTAGGGG AAAATTTGAG TCAACTAATC CACAAGCTAG TGCTAGGCGC GCTTTGTATC
CTAAGTTTGT GGGGGATCTC GTGCAATGGA TTAGCGCAAC CATTGAGCGC GGCTTTCACG
CAGCTTAAAT TTGAACATAT TCGCAGTGAA GATGGTCTCA ACCAGAATAC GATTACCAGC
CTGTTTATGG ACAGTGCTGG CATGTTGTGG ATTGGTACTC AAGATGGTTT GCATGCCTAC
AACGGTCATA ACTTCACCAT TTTTACCCAC TCCCCCAACG ATCCTAGCAG TATTTCAGAA
AGTTATGTCT CTGACATTAT TCAAGATTCA GAAGGCTACA TTTGGGTTTC CACGTTCAGC
CAAGGGGTCA ATCGACTCGA TTTGAGCACT GGGACCTTTG AGCACTTTGG CCAAGAACAA
GGTCTGACCG ATCCCCGCAC CACCAAACTC AGCATAGTGG GTAATACACT CTGGATTGGT
ACTAAAGCAG GACTATTTTC CCTATCGACT AAAACCAAAC GCATTACCCA GGTAAGTTTA
GGTAATAGCG TCGAGCCCTA TATCACTAGC TTAGCCAATG TTGAAAACAC TTACCTGCTG
GCAGGTACCC AAGATAGCGG CACCTTTGCC GTCAGTGCAA ATACCATCAC TCGCTTAAAC
GTGCCGCAAA ATGTTACTGC CTATCAAATT AAAGCGAACT CAGCCTACTC GATCACTTTA
GCCCTAGGTG GACAACTATG GCACTACAAC TTGGCCTCGC AACAGGGCGA AATCCTCTGG
CAGACTGACG ATAACGTGCC TTACATTAAG GATTTTATCC AAACCGAACA GGGTGATTTT
TGGGTCGTCG GGCCTGAAGC GGGTCTCATT CAACTCGAGA GAAACGATAA AACATTCACT
GCGACCTATC ATAGGTATGA TTCTAAGCGC ACTAACAGTA TCAGTGAAAA TAACATACTG
AGTGTACTAC AAGATCCCTT TGGCAACTTA TGGCTAGGCG CCAGTTATTC GGGATTAGAT
AAAATTAATA CCCGTCGCCA GTATTTTCAG CATATTTTCG AATACACCGC AGAGCTGTCG
CAACAGAGCA ACAATATTCG CACCTTATTC CGCAGCAAAG ATGATGCCCT CTGGATAGGC
ACTGAAGGCG CAGGGCTTAA GCGCATGTTA GCTAACGGTA AATATGAGCA CTATACGGAG
CGATTTGCTA ACGCCTTAGG GGTGCATCAA CGCAATTTAA ACCTCACCCT GCGAGACATT
GCCCAAGACA AAGCAGGCGT GCTCTGGTTT GCCACTAACT ATGGACTTGG TCGGCTATCG
CCAGAGGGCG ATTTCCAATT ACTCAAGGTC TCAGCAAGTA CAGACCAAGG CTCTGAAGCC
AATTACATCC GAAGTTTAGA AATTGATGAT CAAGGCCATC TCTGGGTCGC AACGACCCAC
GCCCTCTATC GCAAGGCTAT CGATAACGAT GAATTTACTT TTATCTCATT GGCACATATT
GATAATTTCC ATCCGGCACA AAACCAGTTT TTAATCCTGA GAGTGCACAA AGATACGCTT
TGGATAGGCA CACTCGATGG CCTACTGAAA CTGGATATGA AAACGGGCAT AGGTAAATCT
TACTTCCACC AATCCTCAGA TAAAAAAAGT CTAATTAACA ACCGTGTCCG CGATATTTTG
GTGACTCAGG CGGGTGAGGT GTGGTTCGCC ACCCATGGCG GGATCAGTAA GTTGCCCTCA
CAAGATGCCG ATGCAGGCTT TACTCATTAC ACCCGCGAGC AGGGATTACC AAGCGATACC
ATTTACGCCT TACTTGAGGA CCAAGAACAT AATATTTGGT TTAGCAGCAA TGCCGGCATA
GGCAAACTTG ACCCTAAAAC CAATCGCGTC ATCATATTCA ACGAACAGGA AGGATTGCAG
GCACTGGAGT TTAACGGCGG CGTAAAACTC CAGGACAGCG ATGGTGATCT TTGGTTTGGT
GGCATTAATG GCATCAATCG TTTCAATCCC CAGTCGATTC CAGATCAACG ACCCGATGTT
AAAGTCGCAC TCACTGGCTA TAGCATTGCG GGAAAAGGCC ATACGATTCT CGATTTAAGC
CGCCCCCCTA GCATAGTGAT GGACTATAGC GATCAGCTAA TCAGTTTTGA GGTGACCTCA
TTGGATTTCA GCTATAAGGG TAGAAACCGT TTCAGCTATT ATCTCGAAGG GTTTGATAAC
AGATGGCATG AGCTACCCAC AGGCAATGAA ATCACCTTCA CTAACATCAA TCCTGGCCAT
TACCGATTAC ATGTTCGTCA TGGGCTGCAA TATAACTCAG AAGGTGCCTA TGCGCTGCTT
GTCGATCTGA ATGTGCAAGC CCCCTTCTAT CGCTCTCAGT TCGCCTATGT ACTTTACAGC
TTACTGACTT TAGGGCTGCT GGCTTGGACT ATTATCTGGC GTAGGAACAA ACGCCAACAA
CAACGTGAAT TTGAAACCAG TATCCGCGCC TCAGAGGAGC GGCTAAAGCT GGCACTTTGG
GCGTCTGGCG ATGGCATGTG GGACTGGAAC ATAGCCGAAA ACCAGGTCTA TCGTACCAAT
ATGGACTCTT CGATTCCCCA TTGGAACAGC AGCAATATTG CCCATGAGAG CATGCACTCT
GAAGACAGAG AGAGATTCAA ACTTGAGCTA AACGAGCACC TTCAAGGCCG CTCGCCTTTC
TTCGAAGCCG AGTACCGTGT CGAACGCTCA CCGGGTAATT GGGTGTGGAT TTTAGACCGT
GGCAAAGTGG TTGAAAAAGA TAGCCTAGAT AACCCAATCC GCATGACAGG GACTAATCGT
AATATCACCT CTCGTAAACT GATTGAGAAC GAGCTGGTAT TGTCCTCGCA AGTGCTCAAC
AGCATGAATG AAGCGGTTGT CGTTGCGGGC CTAGATTATC GCATTCGCTC GGTTAACCCT
GCCTTTTGTG CCATTACTGG CTACACAGAG CGCCAAATCA CCGACAGGCA TTTCATTCAT
TTAGCCTTTG GGCGCCAACA GCGTGAATTG TTCAATACCA TTGAACAACA GCTACTGCGC
CATAAACATT GGGTCGGGGA GCTGTGGATC CGCAATAAAC AACGACAGGC GATTTTAGTC
TGGCTTGAGA TCAACCAAGT TATCGATATT AAAGGTGAAA CCAGTCACTT CGTCGCGGTA
TTTACCGATA TCACACAGCG GAAAAAAGCC GAAGAAGATC TGCGTTTCCT CGCCAGTTTC
GACACCTTAA CGGGCCTGCC TAACCGGACC TTATTCCAAG ACAGGCTCAA TCACGCGATT
ACCCAAGCGC ATAGGGCGAA CAATATCGTC GCTTTACTGT TTTTAGATCT CGACCGCTTT
AAACATATCA ACGACTCCAT GGGGCACCAT GTCGGCGATT TACTGCTCAA AGCAGTCGCC
AGAAGACTGC AAAATGCGGT GCGCGATGGC GATACTGTCG CACGCCTAGG CGGTGATGAA
TTTACCATTA TTTTAGAAGG GGTGGCGAAA ACAAAAGCCG CTACTTTGAT CTCAGAAAAA
GTGCTCAGAG CATTCCAAAC GCCCTTCTTA TTGGACGATA AAACGCTAAC CATTTCGACC
TCCATCGGCA TCAGTCTCTA TCCAAACGAT GCTGATAATG CCGACTCGCT GATTAAATTT
GCCGATACTG CCATGTACCA CGCGAAATCC TCAGGTAGAA ATAACTTCCA GTTTTATACT
TCTAAGTTAA ATGAAATTGC CACTCGCCAT GTGCAACTCG AAAGTGGGTT AAAAGAGGCG
ATTCAGCGCA ACGAGTTGAG CTTAGTTTAT CAGCCTAAGT TCTGTTTAAA AGATGGCTCG
CTGACTGGGA TAGAAGCGCT TTTACGTTGG CATCACACTG AACTTGGCCC CATTTCCCCC
GTCGAGTTTA TTCCGCTGGC GGAAGAAACC GGCATCATCA CCCAAATTGG CCATTGGGTG
ATCAATCAAG CTTGCCAGCA ATTAGCCGAA TGGAACAGCT TAGGATTCAA CGGTATCACT
GTCGCCGTTA ACCTATCGGC TCGCCAACTT AAGGCCGATA TTATCTCCAC TATAGAAGTT
GCCTTAGCGG TTTCAGGTCT CCCGGCACAA TCCCTTGAGC TTGAACTGAC AGAGTCGATG
ATCATGGGCA ATCCGCAGGA GTCAGTCAGT ATTCTATCTA AACTAAAGGC CCTAGGCTTG
ACCATAGCGG TGGATGATTT TGGGACGGGT TATTCGAGCC TAAGTTATCT CAAACGCTTC
CCGATAGACA CGCTGAAAAT CGATCGAGAG TTCGTCAGAG ACATCACCAA TGATCCTGAC
GATGCGGCCA TCACCAGCGC CATTATTGCC CTCGCTCACA GCTTAGACCT GAACGTTGTC
GCCGAAGGCG TAGAGACCCA AGAACAGCTA AACTTCTTGG CGATGCAGGG TTGCGATCAA
GTACAAGGTT TCTTACTCAG TAAACCCTTA AGTGCCGCGG ATTTTTTAAC TTTACTCAAG
AATCAATCTA AGCCACAGCC GATTTGA
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| Protein sequence | MVGENLSQLI HKLVLGALCI LSLWGISCNG LAQPLSAAFT QLKFEHIRSE DGLNQNTITS
LFMDSAGMLW IGTQDGLHAY NGHNFTIFTH SPNDPSSISE SYVSDIIQDS EGYIWVSTFS
QGVNRLDLST GTFEHFGQEQ GLTDPRTTKL SIVGNTLWIG TKAGLFSLST KTKRITQVSL
GNSVEPYITS LANVENTYLL AGTQDSGTFA VSANTITRLN VPQNVTAYQI KANSAYSITL
ALGGQLWHYN LASQQGEILW QTDDNVPYIK DFIQTEQGDF WVVGPEAGLI QLERNDKTFT
ATYHRYDSKR TNSISENNIL SVLQDPFGNL WLGASYSGLD KINTRRQYFQ HIFEYTAELS
QQSNNIRTLF RSKDDALWIG TEGAGLKRML ANGKYEHYTE RFANALGVHQ RNLNLTLRDI
AQDKAGVLWF ATNYGLGRLS PEGDFQLLKV SASTDQGSEA NYIRSLEIDD QGHLWVATTH
ALYRKAIDND EFTFISLAHI DNFHPAQNQF LILRVHKDTL WIGTLDGLLK LDMKTGIGKS
YFHQSSDKKS LINNRVRDIL VTQAGEVWFA THGGISKLPS QDADAGFTHY TREQGLPSDT
IYALLEDQEH NIWFSSNAGI GKLDPKTNRV IIFNEQEGLQ ALEFNGGVKL QDSDGDLWFG
GINGINRFNP QSIPDQRPDV KVALTGYSIA GKGHTILDLS RPPSIVMDYS DQLISFEVTS
LDFSYKGRNR FSYYLEGFDN RWHELPTGNE ITFTNINPGH YRLHVRHGLQ YNSEGAYALL
VDLNVQAPFY RSQFAYVLYS LLTLGLLAWT IIWRRNKRQQ QREFETSIRA SEERLKLALW
ASGDGMWDWN IAENQVYRTN MDSSIPHWNS SNIAHESMHS EDRERFKLEL NEHLQGRSPF
FEAEYRVERS PGNWVWILDR GKVVEKDSLD NPIRMTGTNR NITSRKLIEN ELVLSSQVLN
SMNEAVVVAG LDYRIRSVNP AFCAITGYTE RQITDRHFIH LAFGRQQREL FNTIEQQLLR
HKHWVGELWI RNKQRQAILV WLEINQVIDI KGETSHFVAV FTDITQRKKA EEDLRFLASF
DTLTGLPNRT LFQDRLNHAI TQAHRANNIV ALLFLDLDRF KHINDSMGHH VGDLLLKAVA
RRLQNAVRDG DTVARLGGDE FTIILEGVAK TKAATLISEK VLRAFQTPFL LDDKTLTIST
SIGISLYPND ADNADSLIKF ADTAMYHAKS SGRNNFQFYT SKLNEIATRH VQLESGLKEA
IQRNELSLVY QPKFCLKDGS LTGIEALLRW HHTELGPISP VEFIPLAEET GIITQIGHWV
INQACQQLAE WNSLGFNGIT VAVNLSARQL KADIISTIEV ALAVSGLPAQ SLELELTESM
IMGNPQESVS ILSKLKALGL TIAVDDFGTG YSSLSYLKRF PIDTLKIDRE FVRDITNDPD
DAAITSAIIA LAHSLDLNVV AEGVETQEQL NFLAMQGCDQ VQGFLLSKPL SAADFLTLLK
NQSKPQPI
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