| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4140 |
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| Symbol | prpB |
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| ID | 5755967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4900997 |
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| End bp | 4901875 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641290493 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001556559 |
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| Protein GI | 160877243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA GCGCAGGATT ACGTTTTCGC CAAGCTCTTG CTAAGGCCAA ACCGTTACAA
ATCGTTGGCA CCACCAATGC CTATTTTGCC TTAATGGCAG AACAAACAGG CTTCCAAGCC
TTGTATCTTT CGGGCGCTGG CGTTGCCAAT GCTTCCTACG GTTTGCCTGA CTTGGGCATG
ACCTCAATGA ATGACGTGCT GATTGATGCA GGCCGCATCA CCTCTGCCAC GCAAGTGCCT
TTATTGGTCG ATATCGATAC TGGCTGGGGC GGCGCATTCA ACATTGCGCG TACCATCAAA
GAATTCGAAA AAATCGGTGT CGCCGCAGTG CACATGGAAG ACCAAGTGTC GCAAAAGCGT
TGCGGTCACA GACCCAACAA AGCAGTTGTG AGCATAGAAG AAATGGTCGA TCGCATTAAA
GCGGCCGTTG ATGCCCGTAC CGATCCTAAC TTTGTGATCA TGGCGCGTAC CGATGCGGTT
GCCGTGGAAG GCTTAGAGGC AGGTATCGAA CGCGCGCAAG CCTATATTGC CGCCGGCGCT
GACATGATCT TCGCCGAAGC TTTAACTGAG CTAGACCAAT ATCGCCACTT TAAAGCGCAA
GTCAAAGCAC CGATTTTGGC CAACATGACT GAATTTGGTC AAACCCAATT GTTCAATAAA
GAAGAACTCG CCGAGGCGGG CGCCGACATG GTGCTTTATC CACTCGGTAC TTTTCGTGCA
GCCAACCAAG CGGCACTGAA CGTCATGCAA GCGCTGATGA ATGATGGTCA TCAACGCAAC
GTGCTCGACA CTATGCAGAC CCGTAAAGAC TTGTATAAGT ACTTGGGCTA CCACGCCTTT
GAAGACAAGT TAGATCAACT GTTTAGCCAA GATAAATAG
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| Protein sequence | MTQSAGLRFR QALAKAKPLQ IVGTTNAYFA LMAEQTGFQA LYLSGAGVAN ASYGLPDLGM
TSMNDVLIDA GRITSATQVP LLVDIDTGWG GAFNIARTIK EFEKIGVAAV HMEDQVSQKR
CGHRPNKAVV SIEEMVDRIK AAVDARTDPN FVIMARTDAV AVEGLEAGIE RAQAYIAAGA
DMIFAEALTE LDQYRHFKAQ VKAPILANMT EFGQTQLFNK EELAEAGADM VLYPLGTFRA
ANQAALNVMQ ALMNDGHQRN VLDTMQTRKD LYKYLGYHAF EDKLDQLFSQ DK
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