| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4085 |
|---|
| Symbol | |
|---|
| ID | 5755908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4818854 |
|---|
| End bp | 4819432 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641290435 |
|---|
| Product | HupE/UreJ protein |
|---|
| Protein accession | YP_001556505 |
|---|
| Protein GI | 160877189 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2370] Hydrogenase/urease accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00450512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTA TCGGGTTGTT ATTACTGCTC ACTTTATGTT GGATCGCGCC GGTATCGGCC
CATGAGATCC ATTCGGGTGG CGGTTTCATG TCGGGTTTTA ATCATCCGGT ATTGGGCTTT
GATCACTTGC TCGCTATGTT GAGTGTGGGC ATGTTGAGCA CCCAGCTCGG TGGCCGCGCA
ATTTGGACTG TCCCCTTAGC ATTTGTCACC TTTATGTTAG TGGGCGGGAT TTTAGGCTTA
TACGCCATTG CCGTTCCCTT CGTTGAAATC GGCATTGCCC TCTCGGTATT GTTACTCGGC
CTCGCCATCG CTTTTGATCG TCAAATTCCA CTGTTATTCG CCATGGCATT TGTGGGCGTA
TTTGCGATTT TCCACGGGCA TGCCCACGGC GCAGAAATGC CAGCATTGGC AAGCCCGGTT
TTGTATGCCC TAGGATTTTT ATTTGGCACA GCGGTCATCC ATTTAGGCGG CGTAATGATA
GGCCTTGGAA TGCAGCGGAT GACTGGGCAG CGGAACCTCA TGCGTGTCAC GGGCGCAGCG
ATTGCGGCCA TGGGCGGTTA TTTGTTAGCT GGATTTTGA
|
|---|
| Protein sequence | MARIGLLLLL TLCWIAPVSA HEIHSGGGFM SGFNHPVLGF DHLLAMLSVG MLSTQLGGRA
IWTVPLAFVT FMLVGGILGL YAIAVPFVEI GIALSVLLLG LAIAFDRQIP LLFAMAFVGV
FAIFHGHAHG AEMPALASPV LYALGFLFGT AVIHLGGVMI GLGMQRMTGQ RNLMRVTGAA
IAAMGGYLLA GF
|
|---|
| |