| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4003 |
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| Symbol | |
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| ID | 5755822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4713271 |
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| End bp | 4715346 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641290349 |
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| Product | cytochrome c nitrate reductase biogenesis protein NrfE |
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| Protein accession | YP_001556423 |
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| Protein GI | 160877107 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF
[TIGR03145] cytochrome c nitrate reductase biogenesis protein NrfE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTA TGCTTCCAGA AATAGGCCAT ATATTGCTGA TTATCAGCAC TGTCATTGCA
CTATTATCTG CAATGGTACC TTTAGTGGGA ATTTATAGAG ATAATGCTTA CTTAACAGGC
TACAGCCCAG CATTATTTAG AGCATTATTT ACCTCGATAT CCGCAGCACT CCTTTGCTTA
ATTTATAGTT TTATCAGTGA TGATTTTTCT GTTGCCTATG TTGCCAATCA TTCCAATAGT
CAATTAGCCC TTGGGTATAA AGTGGCTGCG GTTTGGGGCA GCCACGAAGG TTCAATGCTC
TTTTGGGTAT TTGCAATCGC ACTCTGGGGC GCCATTATCA GTTATCGCCT ACCAATAACG
GATTGCACTC AGGCCAAAGC CAGCAACCAA TACCAAGACG CTGTTTACTT TGCGAGATTG
CTGGCGATTT TGTCGCTAGT GATTCTGGGG TTTAACTTAT TTTTACTTTT TACTTCGAAT
CCTTTTGCCC GCTTGCTACC CAATATCCCC ATAGAAGGAC GCGATCTCAA CCCAATATTG
CAAGACATAG GCCTTATATT GCACCCACCT ATGCTTTTCC TCGGGTATGT CGGACTTACC
GTTTGTTTTG CCGCCGCCTT AGCATCGCTG CTCGGCGGCA AGTTTAATGC TCGTCAAGTT
AACCACTTAA AGCCTTGGGT GTTACTCGCA TGGATTTTTT TAACGGGCGG AAATGCCTTT
GGATCTTGGT GGGCCTATAA CGAATTAGGC TGGGGAGGAT GGTGGTTTTG GGATCCAGTA
GAAAACGCCT CTTTTATTCC TTGGCTTGTC GCCACCGCAT TAGTCCATTC TATTGTCCTG
ACTAAACGCA CTAATGGCTT TCAAATTACA ACTTTGCTGC TGTGTATATT GGCTTTCTCA
CTCAGTTTAC TCGGCAGTTT TTTAGTGCGT TCCGGCATAG TGCAATCGGT GCATGCCTTT
GCCGCCGACC CGACACGTGG CATGTCAATC CTCTGTTTAT TAATACTTTT TATTGGTGCA
GCTCTGCTCA TTTTCGCACT TAAAGCCAAT AACCTAAGAC ACTCAGTCCA GCATGCGATT
TTCAGTAAAG AAACGCTGTT ATTACTCGGT ATTGTAATAT TAGTCGTCGC TGCATTTTCA
GTTCTACTCG GTACCTTCTA TCCCTTGATC TATGAACTAC TCGGTTTAGG TACACTTTCT
GTCGGTGCCC CTTATTTTAA TGCGATCTTT GTACCGCTGA CCTTCTTACT CGTACTCTTG
ATGGGTGTAG CCCCTTTAGC CCATTGGCAA AAAACATCCA AAGCTCAAGT TAAGCCTTTG
ATCATTCCTG GCACGCTGAT TTTAATTTCG GCTTTGTGGA TAAGCTTGCA GGCAGCTACT
GGCAATAGTT TATTTCTGTT ACTTGGTACT GCAGCAGCAC TTTGGTTACT GGTTTGCTTA
TTATTAACAC TGATCGCAGC ATTAGGATTG AACAAGCAAA CTCATCAACA TAAACAGTCA
GTTAAAGATG CCGTGAACAT GGCTAAGCCT ACCTCTAAAC GACGCTTCAT GGCCATGCTG
CTCGCTCATT TAGGCGTTGC TGTAACAATA ATAGGTGCGA CGGCCGTCTC TTTCTTTGAA
CAAGAAGCCC TGCTAAGAAT GGGGCCTGGG CAAGGAAAAC CTCTGGCAGG TTATGTCTTA
GTTTATGAAA GTACAGAGAA TATCGAGACC AAGAGTTTTA CTGCCATTCA AGCCAATATC
AGTATCCGTG ATGCAGCCCA AGATGAGCTG GTACTAAACT ATCTCACCCC ACAACGACAA
ACCTTTAAAA GCAATGCCAT GGAAATGTCC CATGCGGGAA TTGACCACGG CCTATGGCGG
GATATTTATG TCTCGATGGG ATTGCAACTT AGTGATAACG AATACCTGAT CCGTATCAGC
TATAAACCTC TTGCTAGTTG GATCTGGCTT GGGGCACTGC TAATGATGTT AGGCGGAACT
GTCGCCGCTT GGCCTGCTCG CAGCCTTTGT TATTACCCGA AATCAGAAAC TTTAGCTGAC
CCATCCCATT CATTGAAAAG GGAGACACTT GCCTAA
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| Protein sequence | MTTMLPEIGH ILLIISTVIA LLSAMVPLVG IYRDNAYLTG YSPALFRALF TSISAALLCL
IYSFISDDFS VAYVANHSNS QLALGYKVAA VWGSHEGSML FWVFAIALWG AIISYRLPIT
DCTQAKASNQ YQDAVYFARL LAILSLVILG FNLFLLFTSN PFARLLPNIP IEGRDLNPIL
QDIGLILHPP MLFLGYVGLT VCFAAALASL LGGKFNARQV NHLKPWVLLA WIFLTGGNAF
GSWWAYNELG WGGWWFWDPV ENASFIPWLV ATALVHSIVL TKRTNGFQIT TLLLCILAFS
LSLLGSFLVR SGIVQSVHAF AADPTRGMSI LCLLILFIGA ALLIFALKAN NLRHSVQHAI
FSKETLLLLG IVILVVAAFS VLLGTFYPLI YELLGLGTLS VGAPYFNAIF VPLTFLLVLL
MGVAPLAHWQ KTSKAQVKPL IIPGTLILIS ALWISLQAAT GNSLFLLLGT AAALWLLVCL
LLTLIAALGL NKQTHQHKQS VKDAVNMAKP TSKRRFMAML LAHLGVAVTI IGATAVSFFE
QEALLRMGPG QGKPLAGYVL VYESTENIET KSFTAIQANI SIRDAAQDEL VLNYLTPQRQ
TFKSNAMEMS HAGIDHGLWR DIYVSMGLQL SDNEYLIRIS YKPLASWIWL GALLMMLGGT
VAAWPARSLC YYPKSETLAD PSHSLKRETL A
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