Gene Sbal195_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3994 
Symbol 
ID5755813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4703993 
End bp4705030 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content44% 
IMG OID641290340 
ProductABC transporter related 
Protein accessionYP_001556414 
Protein GI160877098 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGA CTTTCACATT CTCGACGAAT AAGCCTGTGG CTAGTGCTGA TATTGCCGTT 
AAAGCGATAA ATGTCAGTAA GTTTTATAAC AACTTTAAGG CATTGGAAGA CGTGAATTTT
GAGGTCCTAA AAGGCCAAGT TGTTGCTCTC CTTGGTCATA ATGGAGCAGG TAAGTCTACG
TTACTTAAGC TTATTTTAGG ATTGCTAGCA CCTACACGTG GTCAGATCCA AGTTCAAGGA
CACAATGTGG GATCTATGAA TGTCAGGTTG AGTTTATCTT TAGGTTATTT ACCTGAAAAT
GTGAGCTTTT ATGACAACAT GACCGCTCTC GAATTACTCG GCTATTTCGC TAAACTTAAA
GGAGTCGCTC TTGCAAAAGT ACATGAATTA CTTGCCGAAT TTGGTTTAGA AGCCGCTAAA
GATCAACGCC TGAGTACATT TTCCAAGGGA ATGCGGCAGC GTCTTGGGCT CGCTCAGGCA
ATATTGGCTG ATCCTCAGGT ATTGTTACTT GATGAGCCGA CTGTCGGTCT AGATCCCTTA
GCATCGGCTT TTCTGTATCA AAAAATAGCT CAGCTTAAGG CTAAAGGTTG CGCGATTATT
ATTAGCACTC ATGAGCTCGG ATTAGTGCAA GATCAAATGG ATCGGGCTTT GATTTTAGGT
CGAGGACGAA TGTTAGCTTC GGGAACCTTA ACCACCCTAA GAGCTGCGAC TCGGTTGCCA
AACCATCTCT TTTTGCATTC CTTATCCCAC ACTCAAAGGC AAGAGGTACT TGCAGATCCT
ATTTTAGCGG GATGTATTGA GACGAGTTCG GCGCAGGGAT TAAAACTGGC AGTACCGCAG
GAGCAAAAAT CAGGCGTTTT ACATCATCTA TTACAAAAAG TGCCGGCAGG GGATTTTTCT
GTTGAGCCCC CGAGTTTGCA GTCTGTGTTT CATTACTATA TGGAAACCGT TTGTCATTCT
CAGCCTCAGG TTTTATCTAC AGATACCATG CAAGTAACAC ATATGGCTCA AGGCGTTAAG
TGGGAGGCCG CCGTATGA
 
Protein sequence
MNQTFTFSTN KPVASADIAV KAINVSKFYN NFKALEDVNF EVLKGQVVAL LGHNGAGKST 
LLKLILGLLA PTRGQIQVQG HNVGSMNVRL SLSLGYLPEN VSFYDNMTAL ELLGYFAKLK
GVALAKVHEL LAEFGLEAAK DQRLSTFSKG MRQRLGLAQA ILADPQVLLL DEPTVGLDPL
ASAFLYQKIA QLKAKGCAII ISTHELGLVQ DQMDRALILG RGRMLASGTL TTLRAATRLP
NHLFLHSLSH TQRQEVLADP ILAGCIETSS AQGLKLAVPQ EQKSGVLHHL LQKVPAGDFS
VEPPSLQSVF HYYMETVCHS QPQVLSTDTM QVTHMAQGVK WEAAV