| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3914 |
|---|
| Symbol | |
|---|
| ID | 5755733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4613262 |
|---|
| End bp | 4616978 |
|---|
| Gene Length | 3717 bp |
|---|
| Protein Length | 1238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641290260 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001556334 |
|---|
| Protein GI | 160877018 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA GTGAGCCGGA TCTGCAACTA AAATCGCCGA TCCAGAAGAA CTACAACCGT
GCCGTTTTTT ATACGTACAT TGGCGTTATC GTCATGTCTT TGTTGACCGC ATGGATGTTT
TTCGACCGCC AAAAAGCGCA GCAGATGGAA CAGCGTGAAG AACAGGTTCA GCGCCATGTT
CTGCAAATTG ATTTGCTACT CGAGTCGAGC ATTAGAGCGG TAAAAAGCTT ACGCAACGTC
GCCGTGGATC ATTTGCGCTT AGGCGAACTC GTGCGTAAAG AACGTTTACC CCAATACGGT
AAATTCAACG AAAGCGGCCA GTATTTTACC TTAGAACCTA GCTACGCCCA GAGCGGTGAG
CCTTTTACTA ACATGGGTAG GATCACTGGT GCAGGTTCCC TCGATGGCCG CAGCGACAAG
TTCTATCAAG AGCTTGAGAT GTTGTTTGAG CTGTCACTGT CATTCCCCGT CGCCAAAGAA
GCCGCCCCGA AAGCCTCGGC AATTTATTAC CTGTCAAAAC GTAGGATCAT GTCCTATTTC
CCTTGGTCTA ATGACGATCA ACGTTTTAGG GACGAATTAC TCAACAAGAA ACAGTTCCAA
TACGCCACCC CGGCAATGAA CCCGCAGCGC AGTGTGTTTT GGAGCGAAGC CTATGTCGAC
TCCACGGGCA AAGGCTTATT GACCACTTTA GGTGTGCCCG TTTATTTGGA TGATGAGTTC
ATTGGCTCAA TCAACTTAGA CATGACGCTT GCCTCGTTAG CGCGGCAAAT TCGGGTCTAC
TTTAAGATGC CGGGCACAGT GATTTTGCTC GACCAACAGA ACAATATTTT ATCCCACAGC
GATTTTGATA GCTCAGACAT CAATCGGGTT TATCACATCA GCCAACGTAT TCCCTCTGAG
CTGCATTCTT TGCCTGAGTC GGAATTGTTC GATGCCCACG ACGGCATCAT ACGCAACGGC
TATTACATTC ACTCGGTTGC CCTGCATAAC GCGCCTTGGC GTTTACTGTA TTTACAGGAT
GAAGACGACT TATTCCAAGA CTCGTGGGAA AAACTGCAGC TGACCTTTAT TTTAGTGGTT
ATCGCCCTGT CTGTGTTGGT GACCATAGTG CATTGGCAGA CGCGTCGATC TTTTGTGAGC
CCTGCCTCGC GACTACTGTC GCACCTTGAG GGCTGCTCGC AAGAGCCGCG TAAGCCACCG
GAGAAAATCA CCCGCGGCTG GGAACCTTGG TTCTTGCTGG TGAGTCGGAT TTTTGAGGAA
AACAAACAAT ATACCCACCA TTTAGCGGAG CAGAATAAGC GGCTCGATAA GCTAGTGGCG
CGGCGTACTG AACGCTTAAA AGACACCACA GAGCGGCGTG AGCGTGAATA TGCGCTGCTG
CGATCTTTGC TTGACTCGAT CCCAGAAGCC ATTGTCTTTA AAGATAAAGA AGGCAACTAT
TTAGGTTGTA ACAAGGCGGC TGAACGCATG CTAGGTTACA CAGAGAGCGA GATGATAGGT
TTATCATCTG AGGATCTGAC CTCGCCAGAA ATGGGCATTC GTATCCGCGC CGAAGACGAA
CAAGTCTTAA AAGATCGCAC GCCGCTGCGC TACCAAGAAA AGGTTGAGCT TGCGGGTAAA
CCTGTGTTGC TCGATACCCT TAAACTGCCT TTCTATAATC GCCGCGGCGA ATTGCAGGGT
CTGATTGCCG TGTGGCGTGA TGTGACGCGC GAATACGAAT CCGCTGAACA ATTGCGCCTG
TCCGAAGAGC GTTATCACTT AGCCATGGAT GCGGTGGAAG ATGGGCTGTG GGACTGGTAT
TTAGACTCTG AACAGATCAT TTGTAACCCT GCCTATTATT CTATGTTGGG TTATAAAACC
AATGAGTTCC CAGCTCTTGT GTCGACGATT GATGAATTAT CCCATCCCGA CGATCGTATC
CGCGTCGAGG AATACCGAGC TCAGTATCTC GCGGACCCTG TCGGCGCTTA CGAAATCGAA
TTCCGCATGT TAGGTAAAAA TGGCGGCTAT CACTGGGTGT TATCCCGTGG CCGTGTGGTG
GAGTTCACCG CCGAAGGTCA GCCTAAGCGT ATGCTCGGTA CCCATAAGGA TATTACCCGC
CATAAGAGTA ACGAAGTGGC GCTACTGGAA GCCAAGCAAG ACGCCGAATT AGCTAACCTC
TACAAGAGTG AATTCTTGGC TAACATGAGC CATGAGATCC GCACGCCGAT GAACGCCATT
ATCGGTATGT TGCAGTTGGC ACAGCGCACC TCGTTAACGG CGCAGCAGAA AGATTACCTC
GAAAAAGCCG GTTTCTCGGC GCAATCGCTG CTGAGGATCA TCAACGATAT TCTCGACTTC
TCTAAAATTG AGGCGGGTAA GTTGGAGCTT GAGCGGGTGC CATTCCCGCT GGATAAAGTG
CTCGATCATG CCCTCGATCT CAATTCGCTC AAAGCACAGG AGCAGGGCGT TGAGTTACTC
TTGTATGCCC CTGTGACGGC GGGACTCATT CTTAAGGGCG ATCCACTGCG TTTGGGCCAA
GTGCTGATTA ACTTGCTATC GAATGCGGTG AAATTTACCC AATCTGGCGA GATTGAGCTG
GGTTGTGAAG ATGTCGGCGA GCGAGATCAT CGCATTACCT TGAAGTTCTG GGTGCGCGAT
ACTGGTATCG GCATAGGTAA AGATCAACAG GATAAGTTGT TTGATGCCTT TGCCCAAGCC
GACGGTTCGA CTACCCGTAA ATACGGTGGC ACGGGCTTAG GTTTATCAAT CAGTAAGCAT
CTGGTGTCTA TGATGGGCGG TAAGATGCAA GTGCAGAGTG AGCTTGGGGT CGGCAGTACC
TTTAGCTTTA CCATCAGTTT TGAGATTGCC GAAGCCGCTA AGATTGAGCC TTTAGTCGTG
CCGGAAAAAC TCAATAGCCT ACGCACCTTA GTCGTTGACG ATAACCCGAC TGCACTGCAA
ATTTATTCGA GCTTGATGCG AGATTTCCAC TTCGAAGTCG ATACCGCCGC CAGTGGCGCC
GAAGCGCTGT ATAAACTGTC GCGGGCGCCA ATCGATCTGC TATTGCTCGA CTGGATGATG
CCCGAAATGG ACGGCAGCGA TGTGGTCAGC GCCATAGATA CTATGGTCGC CGAAGGCCGC
TTAGCGAAAC GACCAGTGAT TATTATGATG ACGGCCTATG CAGCAGAGCC TTTGCAGCAT
GAAGTCGATA GTGCCAATGT GTTCGCCGTC CTGCAAAAAC CCTTCAAGGC ATCGAGTCTG
TTCGATGAGA TCATTGCCGC CTTTGCCGAT GAGCCGAGAT TGAATGTGGT TCAGCCTATG
GTTGAAGTCC AAGTTGAAGA CGGAGAACAC ACAGGTTTAG TGCTGCTGGT GGAAGATAAC
TTTATCAATC AGCAAGTGGC GACTGAACTC CTTAAAAGTG CAGGCTATGA AGTGGTGCTG
GCCGGCAATG GCCAAGTGGC GCTGGATACC ATCGACTCGC GGCCATTTGA TGCCGTGTTG
ATGGATATTC AAATGCCAGT GATGGATGGG TTAACGGCCG CAAGGGCATT GCGTGAGCGT
TTTAGTGCCG ATGACCTGCC TATTATTGCC ATGACTGCCC ATGCCATGTC GGGCGACAGG
GAGAAGAGTT TAGCGGCGGG GATGAATGCC CACATCACTA AACCCATAGT GCTCAACGAA
TTATTTGAAA CATTAAATCA CTGGATCAAA CACAAGAATC AGCATCAGAA TCGTTAA
|
|---|
| Protein sequence | MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VMSLLTAWMF FDRQKAQQME QREEQVQRHV
LQIDLLLESS IRAVKSLRNV AVDHLRLGEL VRKERLPQYG KFNESGQYFT LEPSYAQSGE
PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSKRRIMSYF
PWSNDDQRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYVD STGKGLLTTL GVPVYLDDEF
IGSINLDMTL ASLARQIRVY FKMPGTVILL DQQNNILSHS DFDSSDINRV YHISQRIPSE
LHSLPESELF DAHDGIIRNG YYIHSVALHN APWRLLYLQD EDDLFQDSWE KLQLTFILVV
IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITRGWEPW FLLVSRIFEE
NKQYTHHLAE QNKRLDKLVA RRTERLKDTT ERREREYALL RSLLDSIPEA IVFKDKEGNY
LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDE QVLKDRTPLR YQEKVELAGK
PVLLDTLKLP FYNRRGELQG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY
LDSEQIICNP AYYSMLGYKT NEFPALVSTI DELSHPDDRI RVEEYRAQYL ADPVGAYEIE
FRMLGKNGGY HWVLSRGRVV EFTAEGQPKR MLGTHKDITR HKSNEVALLE AKQDAELANL
YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTAQQKDYL EKAGFSAQSL LRIINDILDF
SKIEAGKLEL ERVPFPLDKV LDHALDLNSL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ
VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGIGKDQQ DKLFDAFAQA
DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EAAKIEPLVV
PEKLNSLRTL VVDDNPTALQ IYSSLMRDFH FEVDTAASGA EALYKLSRAP IDLLLLDWMM
PEMDGSDVVS AIDTMVAEGR LAKRPVIIMM TAYAAEPLQH EVDSANVFAV LQKPFKASSL
FDEIIAAFAD EPRLNVVQPM VEVQVEDGEH TGLVLLVEDN FINQQVATEL LKSAGYEVVL
AGNGQVALDT IDSRPFDAVL MDIQMPVMDG LTAARALRER FSADDLPIIA MTAHAMSGDR
EKSLAAGMNA HITKPIVLNE LFETLNHWIK HKNQHQNR
|
|---|
| |