| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3892 |
|---|
| Symbol | |
|---|
| ID | 5755707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4586188 |
|---|
| End bp | 4587495 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641290234 |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_001556312 |
|---|
| Protein GI | 160876996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.030857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGATC GTTATGAGGC GGGAGAAACT GCGGTTCTTG TCCATATCGA CTTTTCCGAT
GAGGAACGCC GAGAAGATTT AGTCGAGCTG CAGCTATTAG TGGAATCTGC TGGAGCCCGA
TCAGTCGGGG TGATTACTGG AAGTCGACGT TCGCCGGATC GCAAATTTTT TGTGGGTTCT
GGTAAAGCTG AAGAGTTAGC TGCATTAGTG GCGGCGACCG AAGCCAATGT GGTGATTTTT
AATCATGCAT TGAGTCCAGC CCAAGAGCGT AATCTTGAGC AAGTGTGTCA TTGTCGAGTA
CTCGACCGTA CGACGCTTAT TCTCGATATT TTTGCCCAAA GAGCGCGTAC TCACGAAGGT
AAGTTGCAGG TGGAGCTAGC GCAATTGCGC CATATGTCGA CTCGCCTGAT CCGTGGTTGG
ACGCATCTTG AAAGGCAAAA GGGCGGTATT GGTTTACGTG GTCCAGGGGA AACCCAGCTC
GAAACCGATA GACGTTTGCT CAGAGGACGC ATTAAAAATA TCAACAAGCG CTTAGAGCGA
GTTGATAAAC AACGTGAACA GAGTCGACGT GCACGTAAGC GCAGTGATTT GTCGACAGTG
TCATTAGTCG GCTACACAAA CGCGGGTAAA TCAACGCTGT TTAATGCCCT AACATCATCC
GATGTTTATG CTGCAGATCA GTTGTTTGCC ACACTCGATC CCACGCTAAG AAAGTTAGAT
TTACCCGATG GTGCCGTGAT ATTAGCGGAT ACTGTAGGGT TTATTCGTCA TTTGCCCCAT
GATCTCGTTG CTGCATTTAA GGCAACCTTA CAAGAGACAA GGCAAGCTGA GTTACTACTG
CATATCGTTG ATTGTGCAGA TGAAAACATG GCGGATAACT TTGATCAGGT TCAATCTGTA
CTGAAAGACA TCGAAGCCGA TGAAGTCATG CAACTCGTGG TGTGTAACAA AATCGATTTA
CTCGAGGATG TAACCCCAAG AATTGAATAT AACGACATAG GCAAACCCGT TCGAGTTTGG
GTTTCGGCAC AGAAGCGTTT GGGATTTGAT TTGCTGTTGA AAGCCATCAC TGAGCTAATC
GGTGAGGTGA TTAAAGAGCT AACACTTAGA ATTCCGGCAA CTGCTGGACA TTATCTTGGC
CAGTTTTATC GACTGGATGC GATACAGCAG AAAGAGTACG ACGATCTGGG GAACTGTATT
TTGTCTGTTC GTTTATCGGA CGCCGATTGG CGCCGATTAG CTAAACAGAG TCAGGGTGAG
TTAGAAACCT TCATCTACGA AGATTCGATA GATGAGGCTG TTTGTTAA
|
|---|
| Protein sequence | MFDRYEAGET AVLVHIDFSD EERREDLVEL QLLVESAGAR SVGVITGSRR SPDRKFFVGS
GKAEELAALV AATEANVVIF NHALSPAQER NLEQVCHCRV LDRTTLILDI FAQRARTHEG
KLQVELAQLR HMSTRLIRGW THLERQKGGI GLRGPGETQL ETDRRLLRGR IKNINKRLER
VDKQREQSRR ARKRSDLSTV SLVGYTNAGK STLFNALTSS DVYAADQLFA TLDPTLRKLD
LPDGAVILAD TVGFIRHLPH DLVAAFKATL QETRQAELLL HIVDCADENM ADNFDQVQSV
LKDIEADEVM QLVVCNKIDL LEDVTPRIEY NDIGKPVRVW VSAQKRLGFD LLLKAITELI
GEVIKELTLR IPATAGHYLG QFYRLDAIQQ KEYDDLGNCI LSVRLSDADW RRLAKQSQGE
LETFIYEDSI DEAVC
|
|---|
| |