| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3870 |
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| Symbol | |
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| ID | 5755685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4561666 |
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| End bp | 4563885 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641290212 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001556290 |
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| Protein GI | 160876974 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGTAG GTTTAGCAAA TCCACTCCAA CAGGCCTTGG TGAGTATTTT TAGTGAGTCT
CCGCTAGAAA CCTTAGAGCA AAATGTTGAC CGAGCACTTG AGACCATCAC ATTGCAGTTG
CATTGTGACG GGGTATTTGT ATTAACCGGC AGCCAGTCTC TGGATCGTTT ACGCACGCGT
AATTTGTATC TAAAACCCCA ATTTGCCAAA GGCCAACAAA CCCGAGTCTG GCCCTTAGCA
CGCATGCCAT TTTTTCGCTC CCTTGTCCGC ACCCCGCGAC TATTAAATCT GCCCGATGTG
AATACCTTGC CTGCCGATGC GCAGGCCGAG CGTGCCCTAT TAAGGGACTG GGACGTGAAG
AGTCTATTGG TATTGCCACC TGTGGTATTT GGCGAAACGC GTATTGCGCT GGGCGCAGTC
AATTGCTCCG AGTGTTGCGA ATGGAGCGAA GAGTTTATAA GTGAGTTTAA CCACGCCGCT
GTGATGATTG GCTCGGCGAT GGAACTGACG CGTATCGCCC TGAGCATGCT CGCCAGTGAG
CATAAATACT GTGAAGTATT CAATCAGTTA CCCTTAGCCT GCGCCTTGTT AGATAAATAT
AATCAATTGA CTATGCTCAA TAAAGTCGCC CTGCAAACGC TGCCAATCCA ACATGGTTAT
GATTTATTCG ACATGGTGCG TGAGGAAGAA CATGCCATGT TAACTGATAC CTTGCATGTG
GTACGTGAAG GTGTGCTTGG TCAGGCTTGG TGTGAATTAC CGTTGAAATC TATCCATCAA
CTGGCTTGGT TGAAACTCAG TTTTAGCCAG ATCAGTGGCG ATAAAGATAC CTTAGTCATG
ATTGCCGAAG ATGTCAGCGA GAAGTATCGC CTAGCCGATG AGCTGTCCTT CCATGCCAAT
TATGATGCGC TCACTGGATT GCCCAATCGG TTGCATTTCG AAGCCCTATT AGAAAACCTG
CTGCACGCCC ACGACGATAT GCCTATTTGT GTGGCGTTTC TCGATTTAGA CCAATTCCAA
GTCATCAACA ATATCAGTGG CCATCAGGCG GGCGATAAGC TGCTTTGCCA AGTGGCATTA
CGCTTAAAAC AGCTCGTGCG TAAGGGCGAT ATCGTCGCCC GTTTAGGGGG CGATGAGTTT
GGTATCTTGA TGCATTACTG CAATGTGGAC TCGGCGAAAC AAATCGCGAA ACGTATCTGT
ACCCAATTGG CGAACCATGA ATTTATTTGG GAAGGCCGCA GTCATAATGT CAGTGTCAGC
ATGGGGATTG CTAAACTCGA TAAAAAAGCC GCCGACATTT ATACCGTGAT GAGTCAGGCT
GATGCTGCTT GTCGCTTGGC GAAGGATCAA GGCCGCAATG GCTGGCATTT ATACAGTGCG
AGCGATCCTA AAATGAACCG TCTTTATACC GAGATGATGG CGTCGGTGGA CATAGTCGGC
GCACTGGCGT TAAACCAATT TGAGCTTTAT TTTCAAAGCA TAGTGCCATT AAACCGCGAG
GAGTCTGGTC TGCATTTAGA GATCTTACTG CGCATGGTGC AGGCCAACGG CACGATTGTG
TCACCAGCCA TCTTCTTGCC CGCCGCCGAG CGATATAACT TAGCTTCTAA GGTAGACTTG
TGGGTGATCG ATAACTTGCT CAAGTGGGGC GGTTGCCATT TAGATATCTG GCAGCAATTG
GACCTCGTGT CGGTGAATTT GTCGGCGACC TCTTTGGGCG ACTTTGAGTT TATGAACTGG
CTAGAAATGC GTTTGATGGC CGAACCTGAG CTGGTGGACA AGCTTTGCAT CGAGATCACT
GAAACCGCGG CCGTGAGTCA GCTCGATCAA GCGACAAAGT TACTCGATAT ACTGCGCCCA
CTTAATTGTA AGTTAGCCCT CGATGACTTT GGGGCTGGCT TTTCTAGCTT CGCCTACCTT
AAGCGCCTTA ATGTGGACTT TGTGAAGGTG GATGGTCAAT TTGTGGTGAA CATCTGCGAA
GACAGTGCGG ATCAGGCGAT CGTCAAATCG ATTTGCCAAC TCGGCCAAGA TATGGGCTTT
GATGTGGTTG CCGAATTTGT CGAATCCCAA GATATTGGCC GGAAACTGCA AACCCTTGGC
GTCGACTATG CCCAAGGTTA CGCCATCAAT AAACCGATAC GGTTAGCTGA GCTAACGTCA
GGGCTCAGCC GACCTTGGCT CGAAAAACGT GAGACCTTTG CCGCCTATCC ACAGCTCTAG
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| Protein sequence | MLVGLANPLQ QALVSIFSES PLETLEQNVD RALETITLQL HCDGVFVLTG SQSLDRLRTR
NLYLKPQFAK GQQTRVWPLA RMPFFRSLVR TPRLLNLPDV NTLPADAQAE RALLRDWDVK
SLLVLPPVVF GETRIALGAV NCSECCEWSE EFISEFNHAA VMIGSAMELT RIALSMLASE
HKYCEVFNQL PLACALLDKY NQLTMLNKVA LQTLPIQHGY DLFDMVREEE HAMLTDTLHV
VREGVLGQAW CELPLKSIHQ LAWLKLSFSQ ISGDKDTLVM IAEDVSEKYR LADELSFHAN
YDALTGLPNR LHFEALLENL LHAHDDMPIC VAFLDLDQFQ VINNISGHQA GDKLLCQVAL
RLKQLVRKGD IVARLGGDEF GILMHYCNVD SAKQIAKRIC TQLANHEFIW EGRSHNVSVS
MGIAKLDKKA ADIYTVMSQA DAACRLAKDQ GRNGWHLYSA SDPKMNRLYT EMMASVDIVG
ALALNQFELY FQSIVPLNRE ESGLHLEILL RMVQANGTIV SPAIFLPAAE RYNLASKVDL
WVIDNLLKWG GCHLDIWQQL DLVSVNLSAT SLGDFEFMNW LEMRLMAEPE LVDKLCIEIT
ETAAVSQLDQ ATKLLDILRP LNCKLALDDF GAGFSSFAYL KRLNVDFVKV DGQFVVNICE
DSADQAIVKS ICQLGQDMGF DVVAEFVESQ DIGRKLQTLG VDYAQGYAIN KPIRLAELTS
GLSRPWLEKR ETFAAYPQL
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