Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3833 |
Symbol | |
ID | 5755648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4513644 |
End bp | 4514186 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641290175 |
Product | isochorismatase hydrolase |
Protein accession | YP_001556253 |
Protein GI | 160876937 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000616907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0266799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAAAC CCGAAGAATG TGTTCTCGTT ATCGTCGATG TGCAGGGAAA ACTTGCACAA ATCATGGATA ACAGTGACAA GCTGCACCAA CAACTACAGA CCTTAATCCA AGGTGCACAA TTATTTGAAA TACCCATACT GTGGTTAGAA CAGCTACCCG ATAAGCTCGG AGCAACCAGT CCTGAGCTTC AAACCTTGCT AGAGAAAACC GGCTCCCCCA TTGCCAAGCA ACATTTTAGC GGCTGGCACT GTGAAGAGTT TGCGCAGGCA CTCACTAAGA CGGATCGCAA ACACGTCATA CTGGCGGGCA TTGAAACCCA TGTGTGTGTT TATCAAACCT GTTGTGACCT TATAGAACAG CAATATTCGG TGCATCTCGT CGCAGATGGC GTCTCGTCAC GCAGTGCCGA TAATAAACAA CTGGGTATTC AGATGATGAC GGCCAGAGGC GCCTTATTAA CTAACGTGGA ATCGCTATTA TTTGAATTAC AACATCAAGC CCAAGGCGAG CGCTTTAGGG CATTATTAAA ACTGATCAAA TAG
|
Protein sequence | MLKPEECVLV IVDVQGKLAQ IMDNSDKLHQ QLQTLIQGAQ LFEIPILWLE QLPDKLGATS PELQTLLEKT GSPIAKQHFS GWHCEEFAQA LTKTDRKHVI LAGIETHVCV YQTCCDLIEQ QYSVHLVADG VSSRSADNKQ LGIQMMTARG ALLTNVESLL FELQHQAQGE RFRALLKLIK
|
| |