| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3764 |
|---|
| Symbol | |
|---|
| ID | 5755578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4435405 |
|---|
| End bp | 4436310 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641290105 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001556184 |
|---|
| Protein GI | 160876868 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAC TAAGACATCT GCGAACCTTA ATGGCCCTGA AGGAAAGTGG CAGTTTGGCG
GGCGCAGCCA AAAAACGTTT TGTCACTCAA TCCGCACTCT CCCACCAAAT TAAGGAGTTG
GAGCAAAGGA TTAACTCGCC TATTTTTGTG CGTAAGAGTA AGCCGCTGTC ATTCACCCAA
GAAGGTGCAC GCCTGCTTCA TCTCGCGGAA GAGATTTTGC CTAAGGTGTT AGAAACCGAG
ACAGATCTTA AGAATGGCCT TGAAACCGAA ACCAATCAGT TGCGTGTCGG CATTGAGTGC
CACAGCTGTT TTCGCTGGTT AATGCCTGTG ATGGAGCAAT TTAGACAAGA CTATCCCCAA
GCGGAGTTAG ATCTGTCGAG CCGTCACTTG TTCGACTCGC TCAATGCCTT GGAAATGGGT
GAACTGGATA TAGTGCTGAC CTCAGATCCT GTACCTGGGC ATTCACTCGC TTATCAGCAT
TTGTTTGATT TTGAAGTGAA GTTAGTGGTT GCTAAAGATC ATCCTCTAGC AAAAGAAGCC
TATGTCACCC CTAAGCAATT AGCACACTTG CCTATTATCA GTTATCCCGT ACCACTAACG
CGTTTAGACA TCTATCGCCA CTTTTTAGAA CCCGCAGGCA TAGAAGCGGG CGAGCAAAAA
ACCTGTGATT TAACCATGAT GTTATTGCAA CGCATCGCCT GTAAAGACGG CATAGCCGCA
CTGCCGAACT GGTCGATAAA TGAAGGACAT GGCCTAAGCC TCACCACGGT GAAGCTAGGG
CAAGAAGGCT TGAAACGCCC TCTGTTTGGC GCCTATCGCC GCCATAGCGC CAACTCAGCC
TTGATCCAAA ATTGGTTACA ACTGGTGGCG AGTGAAGGTT TATCCCGCCA GCAGAAGACA
AATTAA
|
|---|
| Protein sequence | MIELRHLRTL MALKESGSLA GAAKKRFVTQ SALSHQIKEL EQRINSPIFV RKSKPLSFTQ
EGARLLHLAE EILPKVLETE TDLKNGLETE TNQLRVGIEC HSCFRWLMPV MEQFRQDYPQ
AELDLSSRHL FDSLNALEMG ELDIVLTSDP VPGHSLAYQH LFDFEVKLVV AKDHPLAKEA
YVTPKQLAHL PIISYPVPLT RLDIYRHFLE PAGIEAGEQK TCDLTMMLLQ RIACKDGIAA
LPNWSINEGH GLSLTTVKLG QEGLKRPLFG AYRRHSANSA LIQNWLQLVA SEGLSRQQKT
N
|
|---|
| |