Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3740 |
Symbol | ipk |
ID | 5755554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4406611 |
End bp | 4407465 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641290081 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_001556160 |
Protein GI | 160876844 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.696461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.733432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCTG CAATTTCCCG CAATTGGCCT GCGCCAGCCA AGCTCAACTT GTTTTTACAC ATTAATGGCC GCCGCGCCGA CGGTTACCAC GAACTGCAAA CCTTGTTTCA GTTTATCGAT TACTGCGACA TGCTCGATTT TAAGGTCACT GAAACCCCTG AACTGATTTT GCACTCCAAT ATGTCGGGCG TTGTCGCTGA CAGCGATAAC TTAATTCTGC GAGCCGCAAA ATCATTACAG CAAACCACGG GCTTTAACGG TGGCGCTGAG ATCTGGCTGG ATAAACGGCT GCCCATGGGC GGCGGTTTAG GCGGCGGCTC GTCCGATGCT GCGACCACAT TAGTGGCATT GAACACGTTA TGGCATACCC AATTATCGAC CGAAGAATTG GCTAAAATCG GCCTTAAATT GGGTGCCGAT ATTCCTGTTT TTATTCATGG TTTCGCCGCT TTTGCCGAAG GTGTGGGTGA ACGCTTACAA GCAGTAAATC CGAGTGAGCC TTGGTACTTA GTCATAGCAC CCGATGCCCA TGTTTCCACC GCCGACGTAT TCCAAGATCC ACTTTTACCG CGTGATACCC CGAAACTGGC CATAGATACC TTAATGAGCC AACCTTGGGC AAATGATTGT CAAAAACTAG TCGTTTCTAA ATACCCTCAA GTTGCCAAGG CATTAGGCTG GCTGCTAGAA TATGCGCCGT CGAGAATGAC AGGAACAGGC GCATGCGTGT TCGGGGAATT CACACAACAG CAACAAGCTC TCGCAGCCTT GGCGAAATTA CCGTCTGAAA TGCAAGGATT TGTTGCACAA GGGATGAATC TTTCGCCGCT CATCACGCGA CTCAGTCACC CTTAA
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Protein sequence | MPAAISRNWP APAKLNLFLH INGRRADGYH ELQTLFQFID YCDMLDFKVT ETPELILHSN MSGVVADSDN LILRAAKSLQ QTTGFNGGAE IWLDKRLPMG GGLGGGSSDA ATTLVALNTL WHTQLSTEEL AKIGLKLGAD IPVFIHGFAA FAEGVGERLQ AVNPSEPWYL VIAPDAHVST ADVFQDPLLP RDTPKLAIDT LMSQPWANDC QKLVVSKYPQ VAKALGWLLE YAPSRMTGTG ACVFGEFTQQ QQALAALAKL PSEMQGFVAQ GMNLSPLITR LSHP
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