Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3662 |
Symbol | |
ID | 5755476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4321179 |
End bp | 4322651 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641290005 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001556084 |
Protein GI | 160876768 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0634868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTT CAAAAGAGAT TAGTGCCTCT CCTGACAGTG CTCAATGGCA GTCAATCGAC TGGAAATCCG TAGAGTCGCA TGTATTAAAG CTTCAGATGC GTATCGCAAA GGCAACAAAA GAAGGTGAGC ACGGCAAGGT AAAAGCCTTG CAATGGTTAC TGACGCACTC GCGCTCAGCA AAACTCCTTG CTGTTAAACG AGTGTCGAAA AACAAAGGCA GTAAAACGCC TGGAATAGAC GGCATCATCT GGAACACAGA TGCACGCCGC ATGAAAGCCG TCAATCAATT GAGCAGAAAG GCATACATAG CTAAGCCGCT CAAGCGTATT TACATCCCAA AAAAGAATGG CAAGCTTCGA CCGCTGGGTA TCCCGTGCAT GATAGACAGA GCGCAACAAG CACTCCACCT TCTTGCACTC GAGCCCGTGT CAGAAACACT TGCCGACCCT AACAGCTATG GATTTAGACC AAACCGCAGT ACTGCTGACG CTGTCGATCA GTGCTTTAAG TGTTTGGCTC AAAAGAAATC AGCCCAATGG GTACTCGAAG GTGATATCAA AGCCTGTTTT GACAAGATCG GTCATCAATG GCTTCTTGAT AACATCACCG TAGATAAGCG GATGTTGGAG CAATGGTTAA AGTCTGGTTT TATGGATAAA GGGCTGTTTT ATCGTACTGA CGAGGGCACG CCACAAGGAG GAGTTATATC CCCCTCCTTG ATGTTAATGA CTCTTGCAGG TCTTGAGCAG CACATAAAAT CCACCGCCCT CAAAAAGGGG ACTAGAGCCA ACTTTATTGG GTACGCCGAC GATTTCGTCG TCACTTGTGC TTCAAAGGAA GTGCTGGAGA ACGATATCAA ACCGTTGATT ACTGACTTCT TAGCAGAAAG AGGCTTAACA CTATCCGAAG AGAAAACGCA TATCACTCAC ATCAACGATG GCTTTGACTT CTTAGGTTTT AACCATAGGA AGTACAAAGG AAAACTGCTC ATTAAACCGA GTAAATCCAA TACGTTGATG TTCTTAAGTC ATCTGCGAGG ACTCATCAAA AAGCACGTAA CCCTACCCGT GAACGATCTT ATCAAACTGA TAAATCCGAA ACTTAGGGGA TGGTCGAATT ACTATCGACA CTGCGTCGCG AAACAGGTGT TCGGATATGT AAGCCACAAG CTATTCCATG CGTTATGGCA CTGGGCCAAA AGGCGTCATC CAACCAAATC AAAAACTTGG ATAGCCCTTA AATACTTCGT CAATCGAAAA GGCCAGTGGC AATTTCACGG TTGGCAGAAG TTCTTGGGTA TGGATTGCCA GTTCAATCTC TTCCAAATAG CCAAAGTGCC TATCGAGAGA CATGTGAAAA TCCGAAGTTC TGCAACGCCA TTTGACCCTC AATACCAAGA ATACTTGGTG AAGAGAAAGT CCAAAAGGCT AGCTCGCAAC TCTTGGAACG AACCTGCTCT GACTGCTTTA TAA
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Protein sequence | MMISKEISAS PDSAQWQSID WKSVESHVLK LQMRIAKATK EGEHGKVKAL QWLLTHSRSA KLLAVKRVSK NKGSKTPGID GIIWNTDARR MKAVNQLSRK AYIAKPLKRI YIPKKNGKLR PLGIPCMIDR AQQALHLLAL EPVSETLADP NSYGFRPNRS TADAVDQCFK CLAQKKSAQW VLEGDIKACF DKIGHQWLLD NITVDKRMLE QWLKSGFMDK GLFYRTDEGT PQGGVISPSL MLMTLAGLEQ HIKSTALKKG TRANFIGYAD DFVVTCASKE VLENDIKPLI TDFLAERGLT LSEEKTHITH INDGFDFLGF NHRKYKGKLL IKPSKSNTLM FLSHLRGLIK KHVTLPVNDL IKLINPKLRG WSNYYRHCVA KQVFGYVSHK LFHALWHWAK RRHPTKSKTW IALKYFVNRK GQWQFHGWQK FLGMDCQFNL FQIAKVPIER HVKIRSSATP FDPQYQEYLV KRKSKRLARN SWNEPALTAL
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