| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3582 |
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| Symbol | |
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| ID | 5755396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4213492 |
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| End bp | 4214202 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641289925 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001556004 |
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| Protein GI | 160876688 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.299626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTG CAAAATACCT CGCCCAGTGT GGCATAGGCT CACGCCGTGA AGCCTGCCGT
TTGATTGAGG CCGGACGCAT TACACTCAAT GGCCATATCG CCCGCCACAC AGATCCCATC
CGTTTGGACG AATTATTAAA CTGCCTCGAC CGTATTGAGC TTGATGGCGC ACCTATCACT
CAAACCGAAA CCCTCGCCTA CTGGGTATTT AACAAAGCCG TAGGCACGGA TTGCCGCCTG
CTTGAGCAGG ATGAAACGAG TCTTGTACAC TTGCTTCCCA AAGCGCCAAG ACTCTATCCC
GTCGGCAGGC TCGATAAGGA TTCCCGCGGC CTGTTGCTGT TAACTAACGA TGGTGAGCTG
ACCCATAAAC TGATGCACCC CTGTTTTGCC CACAGCAAAA CCTACCATGT GCGCCTCGAT
AGGCCATTCA CTGATGAGTT TGTTGAACAA ATGGCCAGTG GAGTGCGTTA TAAAGATGTG
CAAACCCTGC CCTGCCAAGT CCGCCGCCTC AGTTCGGACA GCTTTGAAAT CGTGCTGACT
CAGGGACTAA ATCGCCAAAT TCGGCGTATG GCCATCGCCT TAGGCTATAA GGTAATTGAC
TTACAGCGCG TCGCATTAAT GACATTAACG CTAGAATCCT TAGCCGAAGG AGCGATGCGG
CCACTCACCC CACAGGAAGT TGCAGTGCTT AAAGCCACAG TCACAATTTA A
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| Protein sequence | MRLAKYLAQC GIGSRREACR LIEAGRITLN GHIARHTDPI RLDELLNCLD RIELDGAPIT
QTETLAYWVF NKAVGTDCRL LEQDETSLVH LLPKAPRLYP VGRLDKDSRG LLLLTNDGEL
THKLMHPCFA HSKTYHVRLD RPFTDEFVEQ MASGVRYKDV QTLPCQVRRL SSDSFEIVLT
QGLNRQIRRM AIALGYKVID LQRVALMTLT LESLAEGAMR PLTPQEVAVL KATVTI
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