Gene Sbal195_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3579 
Symbol 
ID5755393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4208450 
End bp4210081 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content47% 
IMG OID641289922 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001556001 
Protein GI160876685 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0986947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACA GTATTCGCGT TAAGTTTTCG TTGATGTTTG CCATTATGGC GACAGCGCTC 
ATTGTTATGG CCGTCACCGA CGCCATGCAA AGCCGTGCAA CGGTAAAGCA GATGCAAGAG
TTCAGTCAGT TATTTAATCC TGCGATTTCG GCAATTCTCA ATGCAGACCG CGATCTTTAC
CAAGCACAGC TCAGTGAAGA AGTGTTGTTG AGGGAAGAAT TATCAGCCGA GAATCGCAAG
AGTGAAATTG ATAACTGGCA AGAAAACGTC GACCAAGCCC GTGACCGAAT GGGCGAGTTT
AAAAAAATCC TTAAAGACCA TCTGCTCGTA CTGCAATCCA CCAATGGCTT TGAAGCGCAA
TTTTCCCTTT GGTATCAAGC ATCATCTGAA GTCATTAATG CCGTCAAAAG TAATGACTTT
GAACGCGCGA AACAACTCCA CGAAACCAAA TCCAAACAAG AATTTAAAGC CTTAAGAAGC
ATCTATAATG CCGCAGGGGA AGCGGCCGAT AACCGCGTCA AAGAGCTGGA CTTGCAAGCG
ACAGAACAGG CAACCACCCA AACCCAAATA TCCCTCACCA TAGCCAGCTT AGTGGCCATA
GTCGCTCTGT TGATTGCCTA CTTCGGCCCT AAAATCATCG TTAATGCCAT TAAAGATATC
ACTAGCAGGA TCAATGACAT TGTTGATGGT GACGGTAACT TAACTCAACG GATCCCTATC
AAACGTCAGG ATGAAATCGG TGAGCTTGCC GAGGCCTTTA ACTTGTTTGT AGAACAACTG
CAGCAAATGG TGATCTCGAT TATTGGCCAA ACCAAGGATG TGAGCCAAAC CGTTGAAAGC
CTTGCGACTA AGTCGGCAAC CACTATCAAC ATCAGTCATG AACAAGAGCA GTTTGTCGAT
ACCATAGTCA CAGCAGTCAA TGAAATGAGT GCCGCCGTAA GGGAAGTCGC CAGCAATGCC
CTGCACACGG CAACCGAAAT CACTAAGGTG AACGACCAAA CGGTGGAAGG TAAAAATATC
CTTGCCCAGT CCGTTAATCA TATTCAGCAA CTGTCTGAGT CGGTTAAAAA TGCCGTAACG
GTTATCGAAA AACTCTCAGT CAATTCTGCC AATATTGCCT CAGTGCTCGA TGTGATCCGC
TCTATTGCTG AGCAAACTAA CCTGCTCGCC CTTAACGCGG CCATTGAAGC GGCGCGTGCT
GGCGAACAGG GCCGCGGCTT TGCCGTGGTC GCCGACGAAG TGCGTACACT AGCGAGTCGC
ACCGAAACCT CGACCCAAGA TATTCAGCGT ATGATTGAAG AGTTACAACG CGGCGTAAAT
GATGCAGTTA AAAGCATTGA ATCGGGCGCC AGCCTGACCA CATCAACCGT CACCCTCGCC
AGCCAAACCC AAGATGCATT GGATGAAATC CTAAACTCCA CCTCTAAGGT CAGCGAGATG
TCCACTCAAA CGGCAACGGC GACCGAAGAG CAAACCCATG TAACCGAAGA AATTAACCGT
AACTTGACTG AATTATCCGA TAAAACCAGA TACTGCAACT TAGTCATTCA AGAGACTCAG
CAAATCGTCG TCAACACTAA GGCCATTTGC AGTAACCTAC AAAAAGAAGT GGCGCGATTT
AAAGTCGCCT AA
 
Protein sequence
MFNSIRVKFS LMFAIMATAL IVMAVTDAMQ SRATVKQMQE FSQLFNPAIS AILNADRDLY 
QAQLSEEVLL REELSAENRK SEIDNWQENV DQARDRMGEF KKILKDHLLV LQSTNGFEAQ
FSLWYQASSE VINAVKSNDF ERAKQLHETK SKQEFKALRS IYNAAGEAAD NRVKELDLQA
TEQATTQTQI SLTIASLVAI VALLIAYFGP KIIVNAIKDI TSRINDIVDG DGNLTQRIPI
KRQDEIGELA EAFNLFVEQL QQMVISIIGQ TKDVSQTVES LATKSATTIN ISHEQEQFVD
TIVTAVNEMS AAVREVASNA LHTATEITKV NDQTVEGKNI LAQSVNHIQQ LSESVKNAVT
VIEKLSVNSA NIASVLDVIR SIAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRTLASR
TETSTQDIQR MIEELQRGVN DAVKSIESGA SLTTSTVTLA SQTQDALDEI LNSTSKVSEM
STQTATATEE QTHVTEEINR NLTELSDKTR YCNLVIQETQ QIVVNTKAIC SNLQKEVARF
KVA