Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3509 |
Symbol | |
ID | 5755322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4124780 |
End bp | 4125796 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641289851 |
Product | integrase family protein |
Protein accession | YP_001555931 |
Protein GI | 160876615 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.167819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00517521 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTAAAC GTAAACCTGA GGATGCTTGG TTACCACCTT CAGTCTACAT TCATCGCCGT GCTGGAAAGC CAATTTGTTA TGTGATTAAG CGTCCTAACT CGACTAAGGT GCTGTGCAAA ATCACGGCGA GTAAAGCCGA GGTATGGACT GCATACGAAA AGGCAGTGGC TGAGCTTAGC CTTGAGTACA CGGTTAACCG TTTAGCGATG GAGTATTTGG ATAGTGCAAA CTTTAAAGAG CTTGCCCCCA GAACCCAGCG AGATCGGGAC CGTGAACTTA ATGTGTTCAG TAAAGTGTTT GGCAGTATGT TACCGGACCG TATTGAGCCA CATCATATTA GGCGCTATAT GGATCTAAGG GGGCAATCAA GTAAGACCCA AGCAAACCAT GAACTCGCGG CAGCTAGCGT GATGTTTGCT TGGGGTTATG AGCGTGGGCG CTGTAAAAGC AATCCCGCAA AAGGGATTAA AAAGTTTAAG GTGAAGGCTC GCGATAGATA TATTACGGAT TCGGAGTTCG ATGCCCTGCT TTCATGCGCT GAGATAAGGT TAAAAATTGC CTGTGAAATA AGTTACCTAT GTGCTGCAAG GCAAGGTGAT GTTTTGCAAT TAACTTGGTC GCAGGTTAAT GAAGATGGCT TGTTTATCCA ACAGGGTAAA ACAGGGAAAA AGCAAATCAA AGCTTGGTCG CCTCGACTGC GAAAAGCGAT TGCCGAAGCA AGAACTCTGC ATTCAGGCAT TGCCAGTATT TATGTCATTA ATAAACATCC CAGCGGGAAA TTAACACAAG ATGGATTGCG CAGTGCTTGG AAGCGAGCGA TGGCAAAAAT GGAAATGGAT TATCCGCAGA TTGAACGCAC TTTCACGTTC CATGATATTA AGGCTAAAGG TGTATCAGAC TTTGAGGGAA CACTGTCAGA GAAGCAACAA TACTCGGGCC ATAAAACCTT GGCACAAGTG AACACCTACG ACAGGAAAGT GGAAATAGTA CCGACAATTG GTAGCGTTAA AAAATGA
|
Protein sequence | MRKRKPEDAW LPPSVYIHRR AGKPICYVIK RPNSTKVLCK ITASKAEVWT AYEKAVAELS LEYTVNRLAM EYLDSANFKE LAPRTQRDRD RELNVFSKVF GSMLPDRIEP HHIRRYMDLR GQSSKTQANH ELAAASVMFA WGYERGRCKS NPAKGIKKFK VKARDRYITD SEFDALLSCA EIRLKIACEI SYLCAARQGD VLQLTWSQVN EDGLFIQQGK TGKKQIKAWS PRLRKAIAEA RTLHSGIASI YVINKHPSGK LTQDGLRSAW KRAMAKMEMD YPQIERTFTF HDIKAKGVSD FEGTLSEKQQ YSGHKTLAQV NTYDRKVEIV PTIGSVKK
|
| |