Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3415 |
Symbol | truB |
ID | 5755219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4031127 |
End bp | 4032092 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289748 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001555837 |
Protein GI | 160876521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.630967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000684703 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTCGTC GTCCAAAAGG TCGTTTTATT GATGGGATAG TGCTGCTGGA TAAATCCACT GGCATGAGTT CTAACTTTGC ATTGCAAAGG GTAAAGCGCT TTTTTAATGC GAACAAAGCA GGGCATACGG GCGCACTCGA TCCGTTAGCG ACAGGTATGT TACCTGTGTG CTTAGGCGAA GGGACTAAGT TTTCCCAGCA TCTGTTAGAT GCCGATAAAC GTTATTTGGT CACCGCAAAG CTGGGCGAGC GAACGGATAC CAGTGATTCC GATGGCGAAG TGGTGCAAAC CCGCGCCATT GATTTTACTG AGGCGCAGTT ATTAACCGCG CTTGATTTCT TCCGTGGTGA GACTCAGCAA GTGCCTTCTA TGTATTCCGC GCTTAAATAT CAGGGCCAGC CCCTGTATAA ATATGCCCGT GAAGGCATTG AAGTGCCGCG CGAATCTCGC CCTATTACGG TATTTGAGCT TAATTTTATC GGTCTTGAAG GCGATGAGCT GACCTTAGAC ATTCATTGTT CTAAGGGCAC TTATATTCGC ACTATCATAG ACGATCTCGG TGAAATGCTC GGTTGCGGCG CCCATGTCAT CATGTTGCGT CGCACTCAAG TTGCACAATA TCCCTATGCA AGAATGGTTT CCTTAGAACA ACTTGAAGCG CTTGTTGCTC AAGCACATGA ACAACAGATA GATCCGAGCG TCTTACTTGA TCCGCTGTTA TTACCTATGG ATACGGCTGT GGCTGATTTC CCTGAGGTGA ATGTGCCAGA TGCAATCGCC CCTTACTTAA TGCAAGGTCA GGCTGTTCGG GTCCCCGTTA ATGCAGACTT GAAAACCGAT GAACTGGTGC GTATCACTTT AGGTGACATT CGCCGATTTG TGGGGATTGG CACTATGAAC GAAGACGGCC TACTCGCGCC GAAACGACTC ATAGTGATCC ATGACGAGCC TGCAGAAACT GATTAG
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Protein sequence | MARRPKGRFI DGIVLLDKST GMSSNFALQR VKRFFNANKA GHTGALDPLA TGMLPVCLGE GTKFSQHLLD ADKRYLVTAK LGERTDTSDS DGEVVQTRAI DFTEAQLLTA LDFFRGETQQ VPSMYSALKY QGQPLYKYAR EGIEVPRESR PITVFELNFI GLEGDELTLD IHCSKGTYIR TIIDDLGEML GCGAHVIMLR RTQVAQYPYA RMVSLEQLEA LVAQAHEQQI DPSVLLDPLL LPMDTAVADF PEVNVPDAIA PYLMQGQAVR VPVNADLKTD ELVRITLGDI RRFVGIGTMN EDGLLAPKRL IVIHDEPAET D
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