Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3391 |
Symbol | |
ID | 5755195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4012121 |
End bp | 4013389 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641289724 |
Product | integrase family protein |
Protein accession | YP_001555813 |
Protein GI | 160876497 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00443618 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGCAGA TTGTGACAGC AACAGGCGTA GAGCAAGGCA AGTTAAACGA TGCAGTATTG CGCCGTTGGT TACGGGCAGG GATAACGCGG GACTTTCGGG ACACGCAGTT TCCGGCGGTG CGGTTACGGG CCTCGACCGA TAGACGCCAA GCCTCGGTGT ATTTAGTGAT GAACGAAGCG GGCAAAACCG TGTGGCAAAA GCAGGGTGTG TGGCCCGTGA TGTGCTTGAA GACCTTTTTA ACCGAGTTAC CCAGTCTGTT AGCCAAACGC AGCATGGGCC AAACGGTAAT CAGCAACGAA TTTACCACCG TCGCGCAATT GCTGGCGTGG TTTGTCACCC ATGTGGAATG CAATCGCACC TTAAGCAACA GCTGGCGCAG TAACTGTAAA TCGTTGGTGA GTAAACATCT CAGCGGCTGC TTTGGTGAGT TACCACTCAA TGAGCTGAAC TTTATTGCAG TGGACAGTTA TTTAATCAAA CCCATGTTGG CGCAGGGCTA CTCGGCCAAT TACATCAAAG CGGCGGTGAA AGTGTTAAAG CGGGCGTTAT CGGTCGCGGC CGACTTACGA GTGTTAGACA CCAATAGCTT GGCGGGGTAT CGGGTGCAAA TGAGTTTGAA GATGCCGCCT TTGGTGGGCA CGCAATTAAG CGAGTCGGAC GTGGGCCCGT TATTCAGTGC ATTGCGAAAT GCAGTAAGAC CGGTGGCGAT GCTGTTTGTG TTGATGCTGA TGTTCGGTAC CCGCATAGGT GAAACCCGTT TAGCACGTTG GGACCACTTT GCCGGCGATT ATTGGTTTAT TCCCGCCGAG AATGCCAAGA ACCGCCAAGA GCACCGATTG CCCATGACGC CCACGGCCAA GAAGCTCATT ACCCATTACG CACAGTGGCA ATACACGCAT GTGGGCAAGC GGGCGTTTTT GTTCCCAGGT GAAGTAGGGC CGGTGAGCAT TCGCACCGCG CAATATTGGA GTGAAACGAT TCGGTTTAAG GCGTTTACCT CCCATGCACT GCGCAAACTG TGCCGCACCA TTATTGCCGA CATGGGCGTA GATACCATGG TCGGTGAGCG GATTTTGAAT CACACCTTGC CGCTACTGCT GCGCACGTAC GTTAACAGCA CCTTAGATAA GGGCATGTTG ATGGCGTTGG ATGCCTACCA TGCACACTTA ATCACACTGG GGTTTGATGA TGTGGCGCCC GAGATTATGC GCCAATCGAC CACTGAGCCG AGTGAGCCAG ACGAGCCAAT GTTAGTGGGG TGGTTATGA
|
Protein sequence | MAQIVTATGV EQGKLNDAVL RRWLRAGITR DFRDTQFPAV RLRASTDRRQ ASVYLVMNEA GKTVWQKQGV WPVMCLKTFL TELPSLLAKR SMGQTVISNE FTTVAQLLAW FVTHVECNRT LSNSWRSNCK SLVSKHLSGC FGELPLNELN FIAVDSYLIK PMLAQGYSAN YIKAAVKVLK RALSVAADLR VLDTNSLAGY RVQMSLKMPP LVGTQLSESD VGPLFSALRN AVRPVAMLFV LMLMFGTRIG ETRLARWDHF AGDYWFIPAE NAKNRQEHRL PMTPTAKKLI THYAQWQYTH VGKRAFLFPG EVGPVSIRTA QYWSETIRFK AFTSHALRKL CRTIIADMGV DTMVGERILN HTLPLLLRTY VNSTLDKGML MALDAYHAHL ITLGFDDVAP EIMRQSTTEP SEPDEPMLVG WL
|
| |