Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3371 |
Symbol | prfC |
ID | 5755175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3980110 |
End bp | 3981681 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641289704 |
Product | peptide chain release factor 3 |
Protein accession | YP_001555793 |
Protein GI | 160876477 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0198312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00795059 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTATAG AAATCAATAA GCGACGCACT TTTGCTATTA TATCGCACCC CGACGCGGGT AAAACAACCA TTACCGAAAA AGTGCTGTTA TTCGGAAACG CTTTGCAAAA AGCGGGAACG GTTAAAGGCA AAAAATCGGG TCAGCATGCT AAGTCTGACT GGATGGAAAT GGAGAAGGAC CGTGGTATTT CTATTACTAC GTCTGTGATG CAGTTCCCCT ATGGTGGCGC CCTCGTTAAC CTACTCGACA CGCCTGGTCA CGAAGACTTC TCTGAAGATA CCTATCGTAC TCTGACCGCT GTTGACTCCT GTCTGATGGT CATCGACTCC GCTAAGGGTG TTGAAGAGCG TACCATTAAG TTGATGGAAG TGACACGTCT GCGCGATACG CCGATCGTGA CTTTTATGAA CAAACTCGAC CGCGATATCC GTGATCCTAT CGATCTGATG GATGAAGTCG AAAGCGTGCT GAATATTGCC TGCGCACCTA TTACTTGGCC TATTGGCAGC GGTAAAGAAT TCAAAGGTAT TTACCATATA CTGCGTGATG AAGTGGTCTT GTATCAAGGC GGTATGGGAC ACACTATTCA AGAGCGTCGT GTAATTAAAG GCATTAATAA CCCTGATCTT GAGAAAGCGA TTGGCAGTTA CGCTGCTGAT TTGCGCGATG AGATGGAATT AGTGCGCGGC GCGTCGCATG AATTTGACCA TGCGGCTTTC TTGAAAGGTG AGCTGACGCC AGTGTTCTTC GGTACCGCGT TAGGTAACTT TGGTGTGGAT CATATTCTTG ACGGTATCGT TGAGTGGGCA CCTAAGCCAT TACCGCGCGA AAGCGATGCA CGCGTAGTTA TGCCTGAAGA AGAGAAATTC ACCGGTTTCG TGTTCAAGAT CCAAGCTAAC ATGGATCCAA AACACCGTGA CCGTGTCGCC TTTATGCGTG TGTGTTCTGG CCGTTACGAG CAAGGCATGA AAATGCACCA TGTGCGTATT GGTAAAGATG TTAACGTTAG CGATGCATTA ACCTTTATGG CGGGCGATCG TGAGCGTGCC GAGGAAGCTT ACCCAGGCGA TATCATTGGT TTACATAACC ATGGCACTAT CCGTATTGGC GATACTTTTA CCCAAGGTGA AAAATTCCGT TTCACTGGCG TGCCTAACTT CGCCCCTGAA ATGTTCCGCC GTATTCGTCT GCGCGATCCG CTTAAGCAAA AGCAGCTCTT AAAAGGCTTA GTACAGTTGT CAGAAGAAGG CGCTGTGCAA GTATTCCGCC CAATCGATAC TAACGATTTA ATTGTTGGCG CCGTGGGTGT GCTGCAGTTT GAAGTGGTTG TTGGTCGTCT TAAGAGCGAA TATAACGTTG AAGCCATTTA CGAAGGTATT AGTGTTTCGA CCGCTCGCTG GGTTTATTGT AAGGATGAGC GTAAGCTTGA AGAGTTCCGC CGCAAGTGTA GCCAAAACTT AGCACTCGAT GGTGGTGACA ACTTAACCTA TATTGCGCCA ACTATGGTCA ACCTGAATCT TTCGATGGAA AGGTATCCTG ATATTGAGTT TGCAAAAACC CGCGAGCATT AA
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Protein sequence | MSIEINKRRT FAIISHPDAG KTTITEKVLL FGNALQKAGT VKGKKSGQHA KSDWMEMEKD RGISITTSVM QFPYGGALVN LLDTPGHEDF SEDTYRTLTA VDSCLMVIDS AKGVEERTIK LMEVTRLRDT PIVTFMNKLD RDIRDPIDLM DEVESVLNIA CAPITWPIGS GKEFKGIYHI LRDEVVLYQG GMGHTIQERR VIKGINNPDL EKAIGSYAAD LRDEMELVRG ASHEFDHAAF LKGELTPVFF GTALGNFGVD HILDGIVEWA PKPLPRESDA RVVMPEEEKF TGFVFKIQAN MDPKHRDRVA FMRVCSGRYE QGMKMHHVRI GKDVNVSDAL TFMAGDRERA EEAYPGDIIG LHNHGTIRIG DTFTQGEKFR FTGVPNFAPE MFRRIRLRDP LKQKQLLKGL VQLSEEGAVQ VFRPIDTNDL IVGAVGVLQF EVVVGRLKSE YNVEAIYEGI SVSTARWVYC KDERKLEEFR RKCSQNLALD GGDNLTYIAP TMVNLNLSME RYPDIEFAKT REH
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