Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3307 |
Symbol | |
ID | 5755111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3898807 |
End bp | 3899751 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641289640 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001555729 |
Protein GI | 160876413 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0110166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAC TAGAAGCGGC TAAAGTGTTT GTCACTATTG TCGAGCGCGG CAGCATGATC AGCGCCGCTA ATGCTTTAGA TATGTCGCGT TCTATGGTGA CCCGTTACTT GAGCGAAATG GAAGAATGGT CCGGTGCTAG ATTGTTGCAT CGTTCGACGC GCAGCCTCAG CTTAACGCCA GCGGGTGAGC AAGTGCTGGA TTACTGCCAT CGACTGCTCG AACTGGCGAA CGAAGTGCCA GCGGTGAGTC ATGCTTCGGT GGCGATTCCG CGCGGATTAT TGCGCATTAG CTGCTCCCAG TTTTTGGCGC ATCAGATTTT AGCGCCCGTG GTGCGCCAAT ACTTAGCCAG TTATCCGCAG GCGAGTGTGA ATATCCACGT GAGTAGCCAA ACTGTCGATC TGGTCGCCGA GCGGATTGAT CTTGCGATTC GCATCACCAA TGAACTCGAT CCCAATCTTA TCGCAAGGCG CTTGGGGGAA TGTGAATCTG TGGTGTGCGC TGCACCGAGT TATCTTGCCG CGCGTGCCGC CGTGGTGCAT CCCGAGGATT TAACTCAGCA TAATTGCTTA ACCTATTCCT ACTTTGGCGA TGTGATGTGG CGGTTTTATC AAGCCGATGT GGCTGCGAAA CAGGCTCAGG CGCCGAACTC CGATCCTAAG TTAAACCAAG GGCAGGCGTT TAATGTGCCT GTGAATGGTA ATTTTAGCGC CAATGATTCC ATGGTGGTGC TCAATGCCAC GCTGGCAGGT GAGGGGATTG CAATGCAACC GCTGTGGGCG GCGAAACCCT ATTTAGATTC GGGTCAGTTA GTGCCTTTGT TAACTGAGTT CATGCCGCAG TCACTGGGTG TGTATGGCGT GTATCAATCC CGCAAACATA TGCAGCCTGC ACTCAGGGTG ATGATGGACA TGCTGGTGGC CTATTTTGCC AGCTTGAAAA GCTGA
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Protein sequence | MDRLEAAKVF VTIVERGSMI SAANALDMSR SMVTRYLSEM EEWSGARLLH RSTRSLSLTP AGEQVLDYCH RLLELANEVP AVSHASVAIP RGLLRISCSQ FLAHQILAPV VRQYLASYPQ ASVNIHVSSQ TVDLVAERID LAIRITNELD PNLIARRLGE CESVVCAAPS YLAARAAVVH PEDLTQHNCL TYSYFGDVMW RFYQADVAAK QAQAPNSDPK LNQGQAFNVP VNGNFSANDS MVVLNATLAG EGIAMQPLWA AKPYLDSGQL VPLLTEFMPQ SLGVYGVYQS RKHMQPALRV MMDMLVAYFA SLKS
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