| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3291 |
|---|
| Symbol | |
|---|
| ID | 5755095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 3881028 |
|---|
| End bp | 3883829 |
|---|
| Gene Length | 2802 bp |
|---|
| Protein Length | 933 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641289624 |
|---|
| Product | hybrid sensory histidine kinase BarA |
|---|
| Protein accession | YP_001555713 |
|---|
| Protein GI | 160876397 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.59315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0011455 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAG TCAACAACAT GACCAAATAC AGCCTACGTT CTTGGGTTCT TGTACTGGCG
CTCGCGCCAA CAATCTTGGT CGGTATCCTT CTGGGCAGCT ACTTTACCAT AAACCGTTTT
TATGAGCTCG AAGATACGCT CGTCGAACAG GGCAGCAATA TTATCGAGCC GCTGTCGATT
GCCAGTGAAA TCGGTTTAGT GGCCAATGAT CGCGAGGCGA CCAAACGCTT ACTCGCCGCG
GCGCAGCTCA ACAAATCCAC CTTAGTGAAA TCCATCGCGA TTTTCGACGC CAATAATCAG
CTCTTTGTGA CCTCGCACTA CCACAAAGAT TTTGAAATTA TGCGTTATAA AGAAGCCCTC
AGCACACTGC ATAAAACCGA AATAGAGCAT GTGGGCGACA GTCTGATTTT ACGGACACCG
ATTTTCTCCA CCGGGCCCAG CGCTGCCCCC GCCAATTACG ATATTCAGAC AGACGGAGGT
CAACTCTTAG GTTATATCTC CATCATAATC AATAAAGAAC GCGCTTTACT TGAGCAACAT
AGAGCCGCGG TCGCCGCCTT TATTATCGTG TTGATCGGGG TACAGTTGAA CTTACTGTTC
ACTTTCCGGC TGGTGAAAAA CGTCACTCAG CCCATTACCG AGATGGTGCG CGTCGTCGCT
AAAATCCGTG AAGGTAAATT GGACGCCCGC TTAGATGGCA ACTTGATTGG TGAGCTCGAC
TTACTCAAAC GCGGCATCAA TGCCATGGCG GGGTCGCTAT CGGAATACCA TGATGAGATG
CAGCAAAATA TCGACCAAGC GACTTCGGAT CTGCGGGAAA CCTTAGAGCA GATTGAAATC
CAAAACGTCG AGTTAGATTT AGCGAAAAAA CGTGCCTTAG AAGCCAGCCG AATTAAATCT
GAATTCTTAG CCAACATGTC CCACGAGTTA CGTACGCCGC TCAATGGGGT TATTGGTTTT
GCACGGCAAT TGGTGAAAAC CCCTTTGCAT TCGAGCCAAG TGGATTACAT CAAGACCATT
GAGCGCAGCG CCACTAACCT GCTGGGTATC ATCAACGATA TTCTCGATTT TTCTAAACTC
GAAGCCGGTA AAATGGTGTT GGAAAACATG CCCTTCGGTC TAAGGGAAAC CATAGGCGAT
ACCATCACGC TAATCTCGGG CAGCGCTCAG GCTAAGGGCC TAGAACTGGT CGTCGATATC
GCTCCTAACG TACCGGACAA TGTGAATGGC GATGCAATGC GTGTGTGCCA AATCATCAAT
AACTTGGTCG GTAACGCGAT TAAATTCACC GACTCTGGCA GTGTGATGGT CAAAATCGAA
CTGCAAAGCC AGTCGGAAGA ACAAGTGGTA CTGCGCTGTG ATGTGGTCGA CACAGGTATC
GGTATCGATG AAAGCCAGCA GGACTTTTTA TTCCAAGCCT TTGGCCAAGC CGACTCGTCG
ATTTCCCGCC GCTTTGGTGG CACAGGCTTA GGTTTAGTGA TCACTAAGCG TTTAGTGAAT
CAAATGGGCG GCCAAATCGG CTTTACCTCA TCCCCAGAGA AAGGCTCAAA CTTCTGGTTC
AGTTTGCCAC TTGGCTTAGG TCAGTTCCAA ATCGGTGACT CACTACCACT CGAAAAACTC
AAAGACAAAA CCATACTGTT TTACGAGCCA CGCGTGCTGA CTCATGCTGT CTTGAGTCGC
CAATTGAATC AATGGGATAC CAAAGTGACT CACCATCAGC ATATCCCAAG CTTGCTGACC
ACGCTCAACA CGGCCGAAGC GCCATACGAC TATGTTCTCT TGAGTTGCCA TGGATTTAGC
GATTCAGGAC AACTGGTGAG TACACTTAAC TTGGCGAAGA CCAAAACCGA TTGCCTTGTC
GTGCTATACG ATTGCCAAGA ACAGGATGCC TTGACCCAAT TTATCCGCCC GAATGCCGAT
GTGGTGTTGT CTCTGCCCGT GAGTGAGCAC CAGCTTGCCC GCAACTTACT CTATCCACCG
ATGGAGTACG ACATCATAGC CCCAGTGACC GTAGCCACGC CGGCGGCGCG CCAATCCTTA
ACCGTACTGG CGGTGGATGA TAACTTTGCC AACTTAAAGC TAATCGACAC CTTGCTCAGC
GAGTTAGTGA CGACGGTTAT CGCGGTCAAC AGTGGCGATG AAGCAGTTAA ACAGGCGAAG
ACTCGCACCT TCGATTTGAT TTTTATGGAT ATTCAGATGC CAGGCACAGA TGGCATTAGT
GCCACTAAGC AAATTCGCCA AGGCTCGATG AACCGTAACA CGCCAATTAT TGCCGTGACG
GCCCATGCGA TTGCCGAAGA ACGCGAGCTG ATTTTAGGCA GTGGAATGGA TGGATATTTG
CCTAAACCTA TTGATGAGGA GGCGCTCAAA GACGTTATCC ATCGCTGGAT CACTCGGCCT
AAATTCACCC ATTTTGACCT GCATACGCTG AACTGGGATT TATGTTTAAC CCAAGCAAAT
CATAAGGCAG ATCTTGCCTT AGACATGCTG AGAATGCTGC TCGACTCCTT GCCACAAACC
GTGACGACAA TTCAGACGGC GCTGAGTCAA AACGATCATC CCGTCATGCT CAGTACAATC
CATAAACTAC ATGGTGCGAG CTGCTACTGC GGCGTGCCTA CAACCCAAAG ACTATGCCAA
GAAATTGAAT CGGCGCTAAA ACGTGAAACA GCGGTCGAAG ATCTCGAACC CGAAATACTA
GAGTTACTTG ATGAGTTAAC TAAGGTAGAA TCTGCGGCAA ATCAAGTGAT ATCACAGCTA
TCAGCGGAAA TAACAGATGA CCAAAAAAAC GGGCTTCTTT AA
|
|---|
| Protein sequence | MNPVNNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YELEDTLVEQ GSNIIEPLSI
ASEIGLVAND REATKRLLAA AQLNKSTLVK SIAIFDANNQ LFVTSHYHKD FEIMRYKEAL
STLHKTEIEH VGDSLILRTP IFSTGPSAAP ANYDIQTDGG QLLGYISIII NKERALLEQH
RAAVAAFIIV LIGVQLNLLF TFRLVKNVTQ PITEMVRVVA KIREGKLDAR LDGNLIGELD
LLKRGINAMA GSLSEYHDEM QQNIDQATSD LRETLEQIEI QNVELDLAKK RALEASRIKS
EFLANMSHEL RTPLNGVIGF ARQLVKTPLH SSQVDYIKTI ERSATNLLGI INDILDFSKL
EAGKMVLENM PFGLRETIGD TITLISGSAQ AKGLELVVDI APNVPDNVNG DAMRVCQIIN
NLVGNAIKFT DSGSVMVKIE LQSQSEEQVV LRCDVVDTGI GIDESQQDFL FQAFGQADSS
ISRRFGGTGL GLVITKRLVN QMGGQIGFTS SPEKGSNFWF SLPLGLGQFQ IGDSLPLEKL
KDKTILFYEP RVLTHAVLSR QLNQWDTKVT HHQHIPSLLT TLNTAEAPYD YVLLSCHGFS
DSGQLVSTLN LAKTKTDCLV VLYDCQEQDA LTQFIRPNAD VVLSLPVSEH QLARNLLYPP
MEYDIIAPVT VATPAARQSL TVLAVDDNFA NLKLIDTLLS ELVTTVIAVN SGDEAVKQAK
TRTFDLIFMD IQMPGTDGIS ATKQIRQGSM NRNTPIIAVT AHAIAEEREL ILGSGMDGYL
PKPIDEEALK DVIHRWITRP KFTHFDLHTL NWDLCLTQAN HKADLALDML RMLLDSLPQT
VTTIQTALSQ NDHPVMLSTI HKLHGASCYC GVPTTQRLCQ EIESALKRET AVEDLEPEIL
ELLDELTKVE SAANQVISQL SAEITDDQKN GLL
|
|---|
| |