Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3267 |
Symbol | alaS |
ID | 5755071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3845236 |
End bp | 3847860 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289600 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001555689 |
Protein GI | 160876373 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.235906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCAAA CTACAGCAGA GCTTAGAAGC GCTTTCCTCG AATTTTTCCG CAGCAATGGT CATCAAGTTG TGGACAGTAG TTCATTAGTG CCAGGCAACG ATCCCACACT TTTATTTACC AATGCAGGCA TGAACCAGTT CAAGGACGTG TTTCTTGGCA TGGACAAACG CAATTATACG CGTGCGACCA CTGCTCAACG TTGTGTACGC GCCGGTGGTA AGCATAACGA TTTAGATAAC GTCGGTTATA CAGCACGTCA TCACACCTTT TTCGAAATGC TGGGTAACTT CAGTTTTGGT GATTATTTCA AAGAAGAAGC GATTCGCTTT GGCTGGACTT TCTTAACTGA AACTTTAAAG CTGCCGAAAG AACGTCTGTG TGTCACTATT TATCAAACAG ATGATGAAGC CTTTGAAATC TGGAATAAAA AGATTGGTGT TGCTGCCGAG AACATTATCC GTATCGGCGA CAACAAAGGT GCTGCTTATG CGTCAGATAA CTTCTGGCAA ATGGGTGATA CCGGTCCTTG CGGCCCATGT TCTGAGATTT TCTATGACCA TGGCGACCAT ATTTGGGGCG GCCGTCCTGG CAGTCCCGAA GAAGATGGCG ACCGTTTCAT CGAAATCTGG AACATAGTGT TCATGCAGTA CAATCGTCAA GCGTCGGGTG AAATGCTACC TTTGCCTAAG CCATCGGTTG ATACTGGCAT GGGGATTGAG CGTATTGCCG CGATTATGCA AGGCGTACAT TCTAACTACG AAATCGATAT CTTCCGTACG CTGATCGCCA AAGCGGCTGA AATCATCGGC GTAAGCGATT TAACCGAGAA GTCACTGCGC GTCATTGCCG ACCATATCCG TTCATGTGCA TTCCTTATTG CCGATGGCGT TATGCCGTCG AATGAAGGCC GCGGTTATGT GCTGCGCCGC ATTATCCGCC GCGCAGTTCG CCATGGTAAC AAGTTAGGCG CGACCGAAGC TTTCTTCTAT AAGCTGGTTC CGTCTTTGAT TGCGGTGATG GGCGATGCGG CCAAAGGGTT AGCTGAGACT CAAGCGATTG TTGAAAAAGC ACTGAAAGCG GAAGAAGAGC AATTTGCCCG TACGCTTGAA CGTGGTTTAG GCATTTTAGA TGCGGCTTTA AACGAGTTAA AAGGTGACAC CTTAGACGGT GAAACGGTTT TTAAGCTGTA TGACACCTAT GGCTTCCCAA TGGATTTAAC CGCTGACGTG TGTCGCGAGC GCAACATCAT TGTCGATGAA GCAGGTTTCG AAGTCGCTAT GGCTGAACAA CGTAGCCGCG CCCAAGCTGC CGGTAACTTT GGTGCAGATT ACAACGCTGC ACTGAAAATC GATGCTGAAA CCGCATTCAG TGGTTATACC GAATTAGCGG GCCAAGCTAA GGTCACCGCG ATTTATCAAA ACGGTGAATC AGTGACGGCG ATCAAAGCGG GTGACGAAGC GGTTGTTGTA CTCGACGTGA CACCTTTCTA CGCTGAATCT GGCGGTCAAG TGGGCGATAA AGGCCAACTG GTTGCGAACG GTGTTGAATT TACCGTGAAC GACACGCAAA AGTACGGTCA AGCAACGGGC CATCAAGGTG TTTTAGCTAC AGGTAACTTG AGTGTTGGCC AAGTTGTTGA AGCGAAAGTC GACAAAAAAC TGCGTCACCG TACTCAGTTA AACCATTCTG TTACGCATTT ACTGCATGCC GCACTGCGTC AAGTGCTCGG TACTCACGTT TCGCAAAAAG GTTCTTTGGT TGATCCTGAG CGTTTGCGTT TTGACTTCTC CCATTTCGAA GGCGTAAAAG CGACGGAATT AAAAGAAGTT GAAGAATTAG TTAACACTCA AATTCGTCGT AACCATGAGC TGAAAACCGC TGAAATGGGT ATAGATGAAG CCAAAGAGAA AGGCGCAATG GCGCTCTTTG GTGAGAAATA TGACTCACAA GTGCGTGTTG TGACTATGGG GGATTTCTCT ATCGAATTGT GTGGTGGTAC CCATGTGGGC CGCACGGGCG ATATTGGCTT ATTCAAAATC ACCTCTGAAG CGGGTATTGC TGCGGGTGTA CGTCGTATCG AAGCCGTTAC TGGCGCTGCT GCTATGGCCT ATGTGGCGCA GCAACAAGCT GAACTGGAAG AAGCTGCAGC CTTATTGAAA GGCGATGCCA ACTCAGTCGT TGCTAAGTTA AAAGCCCAGC TCGATAAGAT GAAGCAACTC GAAAAAGAAA TGGCGCAGTT GAAAGACAAG CTCGCGGCTG CAGCGAGTGC TGATTTAGTG GGCGATGCCG TTGTGGTTAA TGGCGTTAAC GTGCTGATCA AAAAGTTAGA CGGCGTTGAG GCAAGTTCAT TACGCGGTTT GCAAGATGAA TTAAAACAAA AATTGAAATC GGCCATTATC GTGCTTGGCA CTGCGCAGGA AGGGAAAGTT AACCTGATCG CCGGTGTGAG TAACGATCTG ATCGGCAAAG TCAAAGCGGG TGAGCTAGTC GCTATGGTCG CTGCACAAGT GGGCGGTAAA GGCGGCGGTC GTCCTGATAT GGCTCAAGCG GGCGGTAGCC AGCCAGAAAA TCTGGATGCG GCATTGGCTC AAGTATTACC TTGGATTACT GAGCGTCTAG CTTAA
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Protein sequence | MYQTTAELRS AFLEFFRSNG HQVVDSSSLV PGNDPTLLFT NAGMNQFKDV FLGMDKRNYT RATTAQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEEAIRF GWTFLTETLK LPKERLCVTI YQTDDEAFEI WNKKIGVAAE NIIRIGDNKG AAYASDNFWQ MGDTGPCGPC SEIFYDHGDH IWGGRPGSPE EDGDRFIEIW NIVFMQYNRQ ASGEMLPLPK PSVDTGMGIE RIAAIMQGVH SNYEIDIFRT LIAKAAEIIG VSDLTEKSLR VIADHIRSCA FLIADGVMPS NEGRGYVLRR IIRRAVRHGN KLGATEAFFY KLVPSLIAVM GDAAKGLAET QAIVEKALKA EEEQFARTLE RGLGILDAAL NELKGDTLDG ETVFKLYDTY GFPMDLTADV CRERNIIVDE AGFEVAMAEQ RSRAQAAGNF GADYNAALKI DAETAFSGYT ELAGQAKVTA IYQNGESVTA IKAGDEAVVV LDVTPFYAES GGQVGDKGQL VANGVEFTVN DTQKYGQATG HQGVLATGNL SVGQVVEAKV DKKLRHRTQL NHSVTHLLHA ALRQVLGTHV SQKGSLVDPE RLRFDFSHFE GVKATELKEV EELVNTQIRR NHELKTAEMG IDEAKEKGAM ALFGEKYDSQ VRVVTMGDFS IELCGGTHVG RTGDIGLFKI TSEAGIAAGV RRIEAVTGAA AMAYVAQQQA ELEEAAALLK GDANSVVAKL KAQLDKMKQL EKEMAQLKDK LAAAASADLV GDAVVVNGVN VLIKKLDGVE ASSLRGLQDE LKQKLKSAII VLGTAQEGKV NLIAGVSNDL IGKVKAGELV AMVAAQVGGK GGGRPDMAQA GGSQPENLDA ALAQVLPWIT ERLA
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