Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3176 |
Symbol | |
ID | 5754968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3749653 |
End bp | 3749991 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641289497 |
Product | translation initiation factor Sui1 |
Protein accession | YP_001555598 |
Protein GI | 160876282 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00012053 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0057416 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAATCTA TGAAAGCAGA TCCTAATGTA TCCTTAGTGT ACAGCACCGA CAAAGGCCGT ATTAATGCAG AGCCCCTCAC TAAAGCGATT CCTGAATCCG ACGGTATAGT CAGGATCCAT AGAGACAGTA AGGGCCGCAA AGGCAAAGGC GTTTCGATTA TCTCAGGCCT AGGTCTCGAT GAAACCGCGT TAAAAGCAAT GGCTCAAACC CTTAAAAAAC AATGTGGTTG TGGTGGCACG GTTAAAGATT TCACTATTGA GGTCCAAACC GATAACCGCG AGCAATTAAA GCTATTGCTT GAGAAGCAGA ACTACAAAGT TAAATTAGCT GGCGGTTAA
|
Protein sequence | MKSMKADPNV SLVYSTDKGR INAEPLTKAI PESDGIVRIH RDSKGRKGKG VSIISGLGLD ETALKAMAQT LKKQCGCGGT VKDFTIEVQT DNREQLKLLL EKQNYKVKLA GG
|
| |