Gene Sbal195_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3072 
Symbol 
ID5754863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3644447 
End bp3645880 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content45% 
IMG OID641289395 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_001555497 
Protein GI160876181 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.584098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.164477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAA CAGATCAACG AATTTTACTT ATCGGCCCCT CATCAGAGCG ATTAAATCGC 
CTGTGTTGCA TTTTTGATTT TTTAGGTGAG CAAATTGCAC AAATTGACGC CGAAAAATTA
AGTGCTAGCC TCCAAGATAC TCGTTTTCGA GCTTTAGTTA TCCTAACTGA TGTTATGGAT
GCTGATGCAC TTAAAAACAT CGCGGGTCAA CATCCATGGC AACCTATGCT GTTGCTTGGC
AACGTTGACG ATCTGCAAGT GTCTAACATT CTTGGAAACA TTGAGGAACC TTTAACCTAT
CCTCAACTCA CCGAATTACT ACACTTCTGT CAAGTATTTG GCCAAGTTAA GCGTCCTCAA
GTCCCCACAA GTGCGAATCA AACTAAGTTA TTCCGAAGCT TGGTTGGGCG CAGTGATGGT
ATTGCCAATG TAAGGCACTT GATTAATCAA GTGGCGACAT CTGAGGCGAC TGTACTAGTA
CTGGGCCAAT CGGGTACAGG TAAAGAAGTG GTCGCCCGTA ATATCCATTA TTTGTCTGAG
CGCCGTGATG GCCCTTTTAT TCCTGTTAAC TGTGGTGCTA TACCGCCAGA GTTGTTAGAG
AGTGAACTTT TTGGTCATGA GAAGGGATCA TTTACTGGGG CAATTTGTTC TCGTAAGGGC
CGTTTCGAAT TGGCGGAAGG TGGCACACTA TTTCTCGATG AAATTGGTGA CATGCCATTG
CAGATGCAAG TTAAATTGCT TCGTGTACTG CAAGAACGGG TATTTGAGCG TGTTGGCGGC
ACTAAGACCA TCAATGCCGA TGTGCGCGTT GTAGCAGCGA CACATAGAGA TTTAGAAACC
ATGATCAGCG TGAATGAGTT CCGCGAGGAT CTCTATTACC GCCTAAACGT ATTCCCGATT
GAAATGCCTG CGCTATGTGA TCGCAAGGAC GATGTGCCTT TGCTATTACA AGAGTTGGTT
AGCCGAGTCT ACAACGAAGG CCGTGGCAAG GTGCGTTTTA CGCAGCGTGC GATAGAGTCG
TTAAAAGAAC ATGCTTGGTC GGGTAACGTG CGTGAGCTGT CTAATTTAGT CGAACGCCTC
ACCATTTTAT ATCCGGGTGG ATTGGTTGAT GTTAACGACT TACCCGTTAA GTATCGCCAT
ATCGATGTGC CCGAATATTG TGTTGAGATG AGCGAAGAGC AACAGGAACG TGATGCTTTG
GCTTCTATCT TTAGTGATGA AGAGCCGGTT GAAATCCCTG AGACGCGTTT CCCTAGTGAG
CTACCACCTG AAGGCGTGAA CCTTAAGGAT TTATTAGCAG AACTGGAAAT CGACATGATA
CGTCAGGCAC TAGAGCTGCA AGATAACGTT GTTGCTCGCG CTGCTGAGAT GTTAGGAATT
CGTCGTACAA CGCTAGTAGA AAAAATGCGT AAGTACGGAA TGACCAAAGA TTAG
 
Protein sequence
MMQTDQRILL IGPSSERLNR LCCIFDFLGE QIAQIDAEKL SASLQDTRFR ALVILTDVMD 
ADALKNIAGQ HPWQPMLLLG NVDDLQVSNI LGNIEEPLTY PQLTELLHFC QVFGQVKRPQ
VPTSANQTKL FRSLVGRSDG IANVRHLINQ VATSEATVLV LGQSGTGKEV VARNIHYLSE
RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAICSRKG RFELAEGGTL FLDEIGDMPL
QMQVKLLRVL QERVFERVGG TKTINADVRV VAATHRDLET MISVNEFRED LYYRLNVFPI
EMPALCDRKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL
TILYPGGLVD VNDLPVKYRH IDVPEYCVEM SEEQQERDAL ASIFSDEEPV EIPETRFPSE
LPPEGVNLKD LLAELEIDMI RQALELQDNV VARAAEMLGI RRTTLVEKMR KYGMTKD