| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3026 |
|---|
| Symbol | |
|---|
| ID | 5754817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3595867 |
|---|
| End bp | 3596970 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641289349 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_001555451 |
|---|
| Protein GI | 160876135 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.252777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.181816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACT TCCTTGATTT AAAAGCTATT AACAACCAAT ACCAGCAAGA GCTAAAAGAA
GCTTGTGCAC GAGTGATAGA TTCTGGTTGG TATATTATGG GCAATGAGCT TGCCCAATTT
GAAACCGAAT TTGCCGCTTA TTGCGGCACA AAGCATTCAA TTGGCGTGGC CAATGGTCTC
GATGCACTTA TTCTCACTTT GCGCGCTTGG AAGGTGCTGG GCAAACTGCA AGCCGGCGAT
GAAGTGATTG TGCAGGCTAA TACTTATATT GCCTCTGTGT TGGCAATTAC CGAGAATGAT
CTCGTGCCAG TATTGGTAGA GCCAAACCCT GGTAGCTATA ACCTCGACCC CGAAACGCTC
GCCGCGGCTA TTACTCCCAA GACTAAGGTG ATTTTACCAG TTCATCTTTA TGGACAGTTG
TCGCCGATGC CAGAAATTAT GGCGATAGCC TGTGCACATA ATCTACTCGT ATTGGAAGAT
TGTGCCCAAT CACACGGTGC TGAAATTAAC GGTAAACGCG CCGGAAACTG GGGTGATGCG
GCAGGCTTTA GCTTTTATCC GGGTAAAAAC TTGGGAGCAC TCGGTGATGC TGGTGCAATT
ACCACAAATG ATGATGAGTT AGCGCAAACT CTTAAAGCCT TAAGGAATTA TGGTTCTCAT
AAAAAGTACG AGAACCTCTA TCAAGGGGTT AATAGCCGTC TTGATGAAAT TCAAGCTGCA
ATGTTACGAG TTAAATTGCG CCATTTAGAT AGCGAAACCG CTCGCCGTCA GCATATTGCT
CAAACTTATC GCACTAATAT CAGCAACCCA TTAATTACGC TGCCACAAGT GAATGAAGAA
CTTGCTCACG TTTGGCATTT ATTTGTTGTG AGTTGTGAAC AGCGAGAAGT TTTGCAACAA
TTTTTAGCTT CAAGAGGTAT TCAAACTTTA ATTCATTATC CAATCCCCCC ACATAAACAG
CACGCTTATA GTCATTATGC TGATTTGCAA TTGCCACTAA CTGAGTTAAT TCATCAGCAA
GTACTTTCTA TTCCGCTTGA TCCTACCATG AGTGATGCGG CGGTTAAGCA AGTTATTGCC
GCAATGAATG AGTTTGCTGG ATGA
|
|---|
| Protein sequence | MINFLDLKAI NNQYQQELKE ACARVIDSGW YIMGNELAQF ETEFAAYCGT KHSIGVANGL
DALILTLRAW KVLGKLQAGD EVIVQANTYI ASVLAITEND LVPVLVEPNP GSYNLDPETL
AAAITPKTKV ILPVHLYGQL SPMPEIMAIA CAHNLLVLED CAQSHGAEIN GKRAGNWGDA
AGFSFYPGKN LGALGDAGAI TTNDDELAQT LKALRNYGSH KKYENLYQGV NSRLDEIQAA
MLRVKLRHLD SETARRQHIA QTYRTNISNP LITLPQVNEE LAHVWHLFVV SCEQREVLQQ
FLASRGIQTL IHYPIPPHKQ HAYSHYADLQ LPLTELIHQQ VLSIPLDPTM SDAAVKQVIA
AMNEFAG
|
|---|
| |