Gene Sbal195_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3017 
Symbol 
ID5754808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3586495 
End bp3587517 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID641289340 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_001555442 
Protein GI160876126 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0758664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTGC TCGTTACCGG TGGTGCAGGC TTTATTGGTT CTGCTTTGGT GCGTATGCTG 
ATTGAGCAAA CGACGTGTGT TGTGATCAAT TTCGATAAGT TGACCTATGC CAGTGATCTC
GAGTCCTTAG CATCTATTGC CGATAGTGAG CGCTATCATT TTATTCAGGC AGATATTGGC
GATAGGGCGA AATTAGATCA AGTGTTTCAG GATTATCTGC CAGATGTGGT GATGCATTTG
GCGGCCGAAA GCCATGTTGA TCGCTCAATT AATGGTCCTG CTGAATTTAT CCAAACTAAT
ATAGTGGGTA CTTATACATT GCTTGAGGCG TGCCGCTGTT ATTTCCAAAG TTTGAATACG
GATAAGCAAA AAGTATTTAG ATTCCATCAT ATTTCTACCG ATGAGGTCTA CGGTTCACTT
GGTGATACGG GGCTCTTTTC TGAGACTACA GCTTATGATC CCAGTTCTCC TTATTCGGCG
AGCAAGGCAT CGGCGGACCA TCTTGTTAGA GCTTGGCATC GCACCTATGG TTTACCGATT
GTCATCACTA ACTGCTCTAA CAATTATGGG CCTTTTCAAT ATCCTGAGAA ATTGATCCCG
TTAATGGTGT TGAATGCATT AGCTGGCAAG CAGTTACCTG TATATGGCAA TGGTCAACAA
GTTCGTGATT GGTTGTACGT TGATGACCAT GTTCGGGCGT TGTTTCTCGT GGTGACCCAG
GGCACAGTGG GGGAGACTTA TAATATTGGT GGCACTAATG AGCGGAGTAA TCTTGAAGTC
GTACATCAAA TATGCGATTT ACTTGAGGAG TTAGTACCCA CTCATGCACA AGCACTTGCG
GCTGATGGTG TTGGTTTTCG CAGTTTGGTA GAACATGTTA CTGACAGAGC AGGGCATGAC
GTTCGCTATG CTATTGATGC TAGCAAGATC CAGCGAGAGC TTGGTTGGCA ACCATTAGAA
TCCTTTGATT CAGGCCTTAG GAAAACTGTC GAGTGGATAG TGGCTCGGTA TCATAAATCG
TAA
 
Protein sequence
MRVLVTGGAG FIGSALVRML IEQTTCVVIN FDKLTYASDL ESLASIADSE RYHFIQADIG 
DRAKLDQVFQ DYLPDVVMHL AAESHVDRSI NGPAEFIQTN IVGTYTLLEA CRCYFQSLNT
DKQKVFRFHH ISTDEVYGSL GDTGLFSETT AYDPSSPYSA SKASADHLVR AWHRTYGLPI
VITNCSNNYG PFQYPEKLIP LMVLNALAGK QLPVYGNGQQ VRDWLYVDDH VRALFLVVTQ
GTVGETYNIG GTNERSNLEV VHQICDLLEE LVPTHAQALA ADGVGFRSLV EHVTDRAGHD
VRYAIDASKI QRELGWQPLE SFDSGLRKTV EWIVARYHKS