Gene Sbal195_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2973 
Symbol 
ID5754764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3530893 
End bp3532062 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content52% 
IMG OID641289297 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001555399 
Protein GI160876083 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.698816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.555945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTC TCTACACAAG TCTGAATTTT GGTCTAGGCG AAGACGTCGA TATGCTGCGC 
GATGCAGTAC AGGATTTTGC CGCGAATGAA ATCGCTCCAA TTGCCGCGAA AGTGGACCAC
GACAACGCCT TTCCCAATGA ACTTTGGCCT GTGCTGGGGA GTATGGGACT GCTCGGCGTG
ACCGTAGCTG AAGAATTCGG CGGCGCGAAC ATGGGCTACC TTGCCCACGT CGTGGCGATG
GAAGAAATCT CCCGCGCATC GGCCTCTATC GGCCTAAGCT ACGGCGCCCA CTCAAACCTG
TGTGTGAATC AAATCAACCG TAACGGTAAT GCCGCGCAAA AAGCCAAGTA TCTGCCAAAA
CTGGTGAGCG GTGAACATAT TGGCGCACTT GCCATGAGTG AGCCAAACGC AGGTTCTGAC
GTAGTATCAA TGAAGTTACA CGCCCGCAAA GAAGGCGACC GATTCATCTT AAACGGCAAC
AAGATGTGGA TCACTAACGG CCCCGATGCG CACACCTATG TCATTTACGC TAAAACCGAC
TTAACCAAAG GCGCACACGG TATTACCGCC TTTATCGTTG AACGTGATTC GAAAGGTTTT
AGCCAAGCGC AAAAGCTCGA CAAACTCGGC ATGCGCGGCT CTAACACCTG CGAACTGGTG
TTTGAAGATG TAGAAGTACC AGAAGAAAAC ATTTTAGGCG GCCTCAATAA CGGCGTAAAA
GTGCTGATGA GCGGCCTAGA TTACGAGCGT GTCGTACTGT CTGGCGGTCC GCTGGGGATC
ATGAACGCCT GTATGGACAT CGTTGTGCCT TACATCCACG AGCGTGAGCA ATTTGGCAAA
TCCATCGGTG AATTCCAACT AGTGCAAGGC AAGTTAGCCG ACATGTACAC AGGCATGAAT
GCCGCCAAAT CCTATGTCTA TAACGTGGCA AAATCCTGCG ATCGCGGTGA AACCACCCGT
AAAGATGCCG CTGGCGCCAT TCTTTATAGC GCAGAACTTG CCACCAAAAT GGCACTGGAT
GCAATTCAAC TGCTAGGCGG CAATGGCTAT GTCAACGAAT ACGCCACCGG CCGCTTACTG
CGTGATGCCA AGCTGTATGA AATCGGCGCC GGCACCTCAG AAATTCGCCG CATGCTGATT
GGCCGCGAAC TGTTCAATGA GTCGAAATAA
 
Protein sequence
MNSLYTSLNF GLGEDVDMLR DAVQDFAANE IAPIAAKVDH DNAFPNELWP VLGSMGLLGV 
TVAEEFGGAN MGYLAHVVAM EEISRASASI GLSYGAHSNL CVNQINRNGN AAQKAKYLPK
LVSGEHIGAL AMSEPNAGSD VVSMKLHARK EGDRFILNGN KMWITNGPDA HTYVIYAKTD
LTKGAHGITA FIVERDSKGF SQAQKLDKLG MRGSNTCELV FEDVEVPEEN ILGGLNNGVK
VLMSGLDYER VVLSGGPLGI MNACMDIVVP YIHEREQFGK SIGEFQLVQG KLADMYTGMN
AAKSYVYNVA KSCDRGETTR KDAAGAILYS AELATKMALD AIQLLGGNGY VNEYATGRLL
RDAKLYEIGA GTSEIRRMLI GRELFNESK