| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2964 |
|---|
| Symbol | |
|---|
| ID | 5754755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3519917 |
|---|
| End bp | 3520732 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641289288 |
|---|
| Product | extradiol ring-cleavage dioxygenase class III protein subunit B |
|---|
| Protein accession | YP_001555390 |
|---|
| Protein GI | 160876074 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.988157 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.549704 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAG TTAAAGCGAG TCGTATGCCT GTGCTATTTG TGCCCCACGG TGGTGGCCCA
ATGCCTTTGC TAAATGATGC CAATCATAAA GAGTTACGTG CTTTTTTAAC CTCAGTGACC
GCGCCCATTG AAACCCCTAA GGCGATTGTG CTGATCACCG CCCATTGGGA AGAATCTGTG
GTGACCTTGT CGAGTAGCCC TAAGCCCGGC ATTTTATATG ACTACTATGG TTTTCCACCC
GAAGCGTATC AGCTGACGTA TCCTGCACCG GGTGAGCCAG AATTAGCGGC ACAGATTGCG
AATATGCTCG CGGATAAGGG TATCGCCGCC CGCTTAGATA GCGAACGCGC ATTTGATCAC
GGTACCTTTG TACCACTTAA GTTGATGTAT CCCGAGGCGA ATATTCCCGT AGTACAAATG
TCGTTAGTCC ACAGTCTCGA TCCTGAAACC CATATAGCGA TTGGCGAAGC CTTAGCGCCG
CTGCGGGATC AAGGGGTATT GATTGTGGGC TCAGGGATGT CGTTTCACAA TATGCGGGCG
TTTTTTTCAA GCGATCCCAC GGTCCAAAGT CGCAGCGCAG AGTTTGACTA TTGGCTGACG
CAAACATTAA CCGCAAGCGT GAACACTGCC GAGACCAAAA CAGCACTGAC TCACTGGCAA
GCGGCTCCTG AGGCGCGGTT TAGTCATCCG CGGGAAGAAC ATTTATTGCC TCTGCATGTG
TGTTTCGGCG CTGGTCACAG TGACTCATCC CAAGCGCTAC GTAACTTTAA CGGCATTTTG
CTAAATACTC TGATCTCAGG CTATATCTGG CAATAA
|
|---|
| Protein sequence | MMQVKASRMP VLFVPHGGGP MPLLNDANHK ELRAFLTSVT APIETPKAIV LITAHWEESV
VTLSSSPKPG ILYDYYGFPP EAYQLTYPAP GEPELAAQIA NMLADKGIAA RLDSERAFDH
GTFVPLKLMY PEANIPVVQM SLVHSLDPET HIAIGEALAP LRDQGVLIVG SGMSFHNMRA
FFSSDPTVQS RSAEFDYWLT QTLTASVNTA ETKTALTHWQ AAPEARFSHP REEHLLPLHV
CFGAGHSDSS QALRNFNGIL LNTLISGYIW Q
|
|---|
| |