Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2915 |
Symbol | |
ID | 5754693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3460563 |
End bp | 3461372 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641289226 |
Product | capsid scaffolding |
Protein accession | YP_001555341 |
Protein GI | 160876025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.46231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAGA AATCGAAATT TTTCCGTGTA TTTACTGAAG GACATACGAC CGACGGCCGA GTCGTTGAGC GCCAGTGGAT CACCGATATT GTAGAAACCT ATAACACGGC AAAGTATGGC GCCCGTATTT GGCTTGAGCA TATTCGCGGT ATTACCCCCG ACAGCGCATT TAAAGCCTAT GGCGATGTGA CCGCTGTAAA GGCTGAAGAA GTCGATGGCA AATTAACTCT GTTTGCGCAA ATCGAGCCAA CAGACGAACT GATCGCCATG AACCAGAAAA AGCAGAAAGT GTATACCAGT GTTGAGATTG ATCCCGACTT TGCCAAAACA GGTAAATGCT ATCTCTCAGG CTTGGCAGTC ACCGATTCCC CCGCATCCCT TGGCACTGAA ATGCTGGCGT TCTCCGCAAC CTGCAAAGAC AACCCGCTTA ACTCGCGTAA GCAACGCCCC GAAAACTTAT TTACCTCAGC AGTGGAAGTG GATTTTGAAT TTGAAGAGGT CAGCGACGAG CCCGGGCTAT TTGCCAAGGT TAAAGCGCTG CTCGGTAAAA ATAAGGCAGA AGCCAAAACC GACTTTGCCG ACGTACATCA GGCCGTTGAA GAAATCGCCC AAGCCGTTGC TCATGCTGAA ACGCAATTCG GTAGCAAGGT CACCAAAGGC ATGGAAGATT TGACCAAGTT GCAGACGGAT TTTAATGAGC TCAGCACGCA ATTTAATGCA CTCAAGACTC AGCTCGAAAA AGAAGAGCCA ACAGGCCAAC GACGTTCACC CGCAACCGGT GGCGACACCA ACATGAAAAC CGATTGCTAA
|
Protein sequence | MAKKSKFFRV FTEGHTTDGR VVERQWITDI VETYNTAKYG ARIWLEHIRG ITPDSAFKAY GDVTAVKAEE VDGKLTLFAQ IEPTDELIAM NQKKQKVYTS VEIDPDFAKT GKCYLSGLAV TDSPASLGTE MLAFSATCKD NPLNSRKQRP ENLFTSAVEV DFEFEEVSDE PGLFAKVKAL LGKNKAEAKT DFADVHQAVE EIAQAVAHAE TQFGSKVTKG MEDLTKLQTD FNELSTQFNA LKTQLEKEEP TGQRRSPATG GDTNMKTDC
|
| |