Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2758 |
Symbol | |
ID | 5754536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3278596 |
End bp | 3280653 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641289070 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_001555185 |
Protein GI | 160875869 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00554758 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000696981 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGACA TTCAACTCGA TACACTTCTG TCTGAAGACG TTACCCCAGA AAACGCATCG CAGGTGATGC AGGCGCTCAG CCAATCACTG AACGAGCACA ACATTCGTTA CTATGTGGAT GATGCGCCGA GCATTACCGA TTCTGAGTAC GACAGGTTGA TGCAGCGTTT ACTCAAGCTT GAGGCGTTAT ACCCCCATTT GATTGTGGCT GATTCACCGA CTCAAAGGGT GGGCGGATTG GCGCTCGCCA AGTTTGATCA GATCACTCAT CTTAAGCCTA TGTTAAGTCT GGATAACGCC TTCGATGAGG CTGATTTCAG TGCTTTCCAC AAACGTGTCA CGGATAAAGT CGGTGAGGTG AGTTTTTGCT GCGAGCCTAA ACTTGATGGC CTTGCCGTGA GTATCTTGTA TCGCCATGGC GTGCTTGAGC GCGCTGCGAC CCGCGGCGAT GGTTCAGTGG GTGAAGACAT CACTGAAAAC GTTAAAACCA TTAAATCGAT ACCGCTTAAA TTGCGCGGTA ATGATTTCCC TGAACTCGTT GAAGTGCGCG GCGAAGCCTT TATGCCTAAA GCCGCCTTTG AAGCGCTGAA CGACAGGGCG CGCGCCAAGG ATGAAAAGCT CTTTGTTAAT CCGCGTAACG CTGCTGCCGG CAGCTTGCGA CAACTCGACA GTAAAATTAC CGCCGCCCGC TCATTGGCTT TTTATGCCTA TGCGCTAGGG GTTGTTGAGC CAGATTCCCA TCCGTTAGCT AAAACCCATT TCGAGCAGTT ACAGCAGCTT AAATCGTGGG GCTTACCCAT TAGTAGCGAA ATCAAAGTCT GCGCTGAATT AAGCCAAGTC TATGACTACT ATAAGGACAT TCTTACTCGT CGCAGCGATT TAGCGTTTGA AATCGATGGC GTAGTGATGA AAGTTAACGA TATTGCCCAG CAGCAACGTT TAGGTTTTGT GGCTAAATCT CCCCGCTGGG CGATTGCCTA TAAATTCCCC GCACAGGAAG AAATGACTTT GCTCGAAGGG GTTGATTTCC AAGTGGGCCG CACAGGTGCC GTGACGCCAG TCGCGCGCTT AAAGCCAGTA TTTGTTGGTG GCGTGACGGT ATCGAATGCG ACGCTGCACA ATGCCGATGA AATTGCCCGC TTAGGCATTA AAGTCGGTGA CACTGTGATC ATCCGCCGCG CTGGCGATGT GATCCCACAA ATTGTTGCCA TAGTGCCAGA AAGACGTCCT GAAACGGCGA CTGACATTGT ATTTCCGCAT AATTGCCCTG TGTGTGGCAG TTTAGTCGAG CGTCTCGAAG GTGAGGCAGT GGCGCGCTGT AGCGGTGGTT TATTCTGCGA AGCGCAGCGT AAAGAAGCGA TTAAGCATTT CGCATCCCGC AAGGCTTTGG ATATCGATGG CATGGGCGAC AAAGTCGTCG AGCAATTGAT TGATAAAGAA CTCGTCCAAA GTCCTGCGGA TCTGTTTAAG CTCACCGCCT CTATGATGAC TATGCTCGAC CGCATGGGGA TGAAGTCGGC AACCAATTTA GCAGCGGCGA TTGAAGCGGC CAAAACCACA ACACTTGCGC GTTTCTTATA TGCCTTGGGC ATTCGCGAAG TGGGCGAGGC GACAGCGGCA AACCTTGCGG CGCACTTTGC TAGTTTAGAT GCGCTGCGGG TGGCAACTGT GGAGCAGTTA ACTGAAGTGG AAGATGTTGG CGCCGTGGTG GCCCAACATG TGGCCCACTT TTTTGCTCAG CCGCATAACC TTGAGGTTAT CGATGCCTTA ATCGCCGCTG GTGTGCATTG GCCGGCCATT GAAGCGCCAA GTGCTGATGC ACAGCCGCTT AAAGGCCAAA CCTGGGTATT GACCGGGACC TTAAATCAAC TCAATCGTAA CGATGCTAAA GCGCAGCTGC AGGCGCTGGG GGCAAAAGTT GCTGGCAGTG TGTCGAAAAA TACCGATTGC TTAGTGGCAG GTGAGGCGGC AGGTTCAAAA CTCGCTAAAG CGCAGGAGCT TGGCGTTAAA GTGATGGATG AGGATGAGTT ATTGGCACTC CTCGCCGCGA ACGCTTGA
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Protein sequence | MQDIQLDTLL SEDVTPENAS QVMQALSQSL NEHNIRYYVD DAPSITDSEY DRLMQRLLKL EALYPHLIVA DSPTQRVGGL ALAKFDQITH LKPMLSLDNA FDEADFSAFH KRVTDKVGEV SFCCEPKLDG LAVSILYRHG VLERAATRGD GSVGEDITEN VKTIKSIPLK LRGNDFPELV EVRGEAFMPK AAFEALNDRA RAKDEKLFVN PRNAAAGSLR QLDSKITAAR SLAFYAYALG VVEPDSHPLA KTHFEQLQQL KSWGLPISSE IKVCAELSQV YDYYKDILTR RSDLAFEIDG VVMKVNDIAQ QQRLGFVAKS PRWAIAYKFP AQEEMTLLEG VDFQVGRTGA VTPVARLKPV FVGGVTVSNA TLHNADEIAR LGIKVGDTVI IRRAGDVIPQ IVAIVPERRP ETATDIVFPH NCPVCGSLVE RLEGEAVARC SGGLFCEAQR KEAIKHFASR KALDIDGMGD KVVEQLIDKE LVQSPADLFK LTASMMTMLD RMGMKSATNL AAAIEAAKTT TLARFLYALG IREVGEATAA NLAAHFASLD ALRVATVEQL TEVEDVGAVV AQHVAHFFAQ PHNLEVIDAL IAAGVHWPAI EAPSADAQPL KGQTWVLTGT LNQLNRNDAK AQLQALGAKV AGSVSKNTDC LVAGEAAGSK LAKAQELGVK VMDEDELLAL LAANA
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