Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2683 |
Symbol | |
ID | 5754450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3186366 |
End bp | 3188291 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641288985 |
Product | ABC transporter ATPase component |
Protein accession | YP_001555111 |
Protein GI | 160875795 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0324813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTCTGG TTCGTATCAA TAGTGGCTCT TTAGCCTATG GTTACACTCC GTTGTTACAA AAAGCGGATT TTACTATTCA ACGCGGCGAG CGCGTGTGTA TTGTTGGCCG TAACGGTGCC GGCAAGTCGA GTTTATTAAA AGTGTTATCC GGCGATGTGC TGCTGGATGA AGGCGAGTTC AATATTGCCG GTAATGTGAG TGTTAGTCGT TTACAGCAAG ATCCGCCAAA AGCAGAGCAA GGAACGGTAT ACGCGTATAT CGCGGCAGGA TTAAAGGAAG TGGGTGAGGC GCTTGAGCGT TATCATCAAC TGTCCCACGA TGTCGCCCAT GCCGATCCAG AACAAATGGA TCGTATGCTG AATGAGATGC AAGGTCTGCA AGAAACCTTA GATCACTATA ATGGTTGGCA GCTCGATTCT CGCATTCAAC AAAACTGCGA GTTGTTAGGC CTCGACCCTG ACAAATCGTT GAGCGAGTTA TCCGGTGGTT GGCAGCGTAA AGTGGCGTTA GCCAGAGCAC TGGTCAGCGA GCCAGATCTG TTGTTACTCG ATGAGCCTAC CAACCATTTA GACATAGACA CGATTGAATG GCTTGAAAAG TTTTTACTTG ATTATCAAGG TGCTATCGTC TTTATCAGTC ACGATAGGGG CTTTATTGCC CGTATGGCGA CGCGGATTGT CGATTTAGAC CGTGGTGTTG TGACCTCATG GCCGGGCAAC TATCAAATGT ATCTTGATGG TAAGCAAGAA TGGTTACGCG TTGAAGCGGA AAAAAATGCC TTGTTTGACA AGCGCCTCGC CGATGAAGAA GTGTGGATCC GTCAAGGTGT TAAAGCCAGA CGTACCCGTA ACGAAGGCCG AGTGCGTGCA CTTAAAGCGC TACGTGATGA GCGCAGTGAG CGTTTGAACC GTCAAGGCAA CGCTAAGATG GCGGTATCGG ATACCGAACG TTCTGGTAAG TTAGTGTTTG ATGTTCAAGA TCTTAACTTC AATTTACCCG ATAAAAATCT GGTGAAAAAC TTTAATACTA CAGTGATCCG CGGTGACCGC ATTGCGCTGA TTGGCCCGAA CGGCTGTGGT AAATCGACCT TGATCAAACT ATTAATTGAA AAGCTACAAC CGCAATCGGG CGAAATTAAA GTCGGCACTA AGCTCGAAAT CGCTTATTTC GACCAATATC GCGAAGCCTT AGATCCTGAA CAAACGGTTG AAGATAACGT TGGTGAAGGT AAAAAAACTA TCACGATTAA TGGTCAAGAC CGCCACATAT TAAGTTATTT GCAAGACTTT TTGTTCTCGC CTATGCGCGC CAGAACACCA GTGAAAGCGC TGTCGGGTGG TGAGAAGAAC CGTCTGTTGC TTGCCAAGCT ATTAATTCGT CCAGCAAACT TAATCATACT CGACGAACCG ACCAACGATC TTGATATTGA GACCCTAGAA TTGTTAGAGT CGCTGCTAAC TGAATATCAA GGCACACTTT TGTTGGTGAG CCATGATAGG GCATTTATCG ATAATACCGT CACCAGTAGT TGGTGGTATG CGGGTAATGG CCATTGGAGC GAGTATGTTG GTGGTTATCA AGACGCAGTG AATCAGGGGG CAAAGTTTTA TTCTGAGGAA CCTAGTTCGC AAAAAGCGGT CGAAGCTCCA GCGGTTGAAA CTAAAGCCGT TGAAGTTAAG GCTGCAGAAC CTGCGAAAGC GGTAAAAAAA CTGTCGTATA AGTTACAGCG TGAGTTAGAG TCGTTACCCA CTGTGATGGA GCAATTAGAG GCCGATATTC TTGCATTGCA GACCACCATT GGACATTCAG ACTTTTATAG TCAGGCGCAG GATAAAGTCA ATCAGGTATT GAGCCAGTTG GCGGATAAAG AAAAGCAATT GGAAGTTTGC TTCGAGCGAT GGGAAGAGCT TGAGTCACTG AAGTAA
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Protein sequence | MSLVRINSGS LAYGYTPLLQ KADFTIQRGE RVCIVGRNGA GKSSLLKVLS GDVLLDEGEF NIAGNVSVSR LQQDPPKAEQ GTVYAYIAAG LKEVGEALER YHQLSHDVAH ADPEQMDRML NEMQGLQETL DHYNGWQLDS RIQQNCELLG LDPDKSLSEL SGGWQRKVAL ARALVSEPDL LLLDEPTNHL DIDTIEWLEK FLLDYQGAIV FISHDRGFIA RMATRIVDLD RGVVTSWPGN YQMYLDGKQE WLRVEAEKNA LFDKRLADEE VWIRQGVKAR RTRNEGRVRA LKALRDERSE RLNRQGNAKM AVSDTERSGK LVFDVQDLNF NLPDKNLVKN FNTTVIRGDR IALIGPNGCG KSTLIKLLIE KLQPQSGEIK VGTKLEIAYF DQYREALDPE QTVEDNVGEG KKTITINGQD RHILSYLQDF LFSPMRARTP VKALSGGEKN RLLLAKLLIR PANLIILDEP TNDLDIETLE LLESLLTEYQ GTLLLVSHDR AFIDNTVTSS WWYAGNGHWS EYVGGYQDAV NQGAKFYSEE PSSQKAVEAP AVETKAVEVK AAEPAKAVKK LSYKLQRELE SLPTVMEQLE ADILALQTTI GHSDFYSQAQ DKVNQVLSQL ADKEKQLEVC FERWEELESL K
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