| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2670 |
|---|
| Symbol | |
|---|
| ID | 5754430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3167333 |
|---|
| End bp | 3167950 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641288965 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001555098 |
|---|
| Protein GI | 160875782 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1279] Lysine efflux permease |
|---|
| TIGRFAM ID | [TIGR00948] L-lysine exporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000865788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGG CATTTATACA AGGTATGGGA ATTGGTGGCA GTTTGATTAT TGCTGTAGGC
GCGCAAAATG CCTTTGTGCT CAAGCAAGGC ATTAAGCGCT CGTACACGTT ACCGATTGCG
TTGCTCTGCT CTATGATTGA TGCGCTGATG ATCACTGCGG GTGTGGCGGG GCTGGGGCAC
ATTATTGAAT CTTTCCCGAC CATTAAGCAT GTGGCGAGTT TCGGTGGCGC GGCGTTTCTG
CTTTGGTACG GTGCAAATGC GCTCAAGGCG TCGTTTGTGG CCAAGGGCAT TGAGATGGAG
CAGGCTGATA ATGCCGATAC CTTCAAAAAG GCCGTGTTGA CTACGCTTGG GATCAGTCTG
CTTAATCCGC ATTTGTACCT CGACACTGTG GTGTTGCTCG GCAGTATCAG CACTCAATTT
GATGATTTAC ATCGACCTTG GTTTGGCGCC GGTGCCGTAT TGGCATCGTT TATTTGGTTC
TTCGGCTTAA GTTTTGGTGC GCGTTTGCTG GCGCCCATTT TTACTCGCCC AGCAGCATGG
CGTTATCTTG ACCGTTTTAT ATGGCTAACC ATGTGGAGTA TTGCCGCCGC GATTATTTGG
CCCTATGTGG CAGGATAA
|
|---|
| Protein sequence | MQAAFIQGMG IGGSLIIAVG AQNAFVLKQG IKRSYTLPIA LLCSMIDALM ITAGVAGLGH
IIESFPTIKH VASFGGAAFL LWYGANALKA SFVAKGIEME QADNADTFKK AVLTTLGISL
LNPHLYLDTV VLLGSISTQF DDLHRPWFGA GAVLASFIWF FGLSFGARLL APIFTRPAAW
RYLDRFIWLT MWSIAAAIIW PYVAG
|
|---|
| |