Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2588 |
Symbol | |
ID | 5754347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 3061284 |
End bp | 3063509 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288882 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001555016 |
Protein GI | 160875700 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.540941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0688936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATA ACTCATCAAC AATTATTTAC ACTGAAACAG ACGAAGCGCC AGCACTGGCC ACCCTCTCAC TCTTACCTAT TATCAGAACG TTTACCGACG CCGCGGGCGT TGCGGTTGAA ACCCGTGATA TCTCGTTATC GGGCCGTATT ATTGCCAGTT TCCCTGAGCA ACTGACCGAA GCACAAAAGA TTGGCGATCA TCTGACTGAG CTTGGCGAGT TAGCGAATCA GCCAGAAGCG AACATCATCA AGTTACCGAA TATCAGTGCT TCGATTCCAC AATTAAAAGC CTGTATCCTT GAACTGCAGC AAAAAGGTTA CGACATCCCT CACTATCCGG ATGAGCCAAA AACCGACGCT GAAAAGTCAA TTAAAACACG TTACGACAAG ATTAAAGGCA GTGCGGTAAA CCCAGTACTA CGTGAAGGTA ACTCAGATCG CCGTGCCCCA TTATCGGTGA AAAACTTCGC CAAGAAAAAT CCGCATTCAA TGGGTAAATG GGCTACAGAT TCTAAGTCAC ACGTTGCTCA CATGACTGAC GGCGATTTCT ACGGCAGCGA GCAGTCAGTG ACTTTATCTG ATGCGGGCAG CGTGAATATC GTGCTGACGC AAAAAGATGG CCAAGAAGTG GTGCTGAAAT CGGGTCTTAA GCTGCTGGCT GGCGAAATTA TCGATGCTGC GGTATTGAGT AAAAAAGCCT TAGTGAGCTT CTATGAGCGT GAAATCGAAA ACGCCAAAGC AGAAGATGTG CTGTTATCGC TGCATCTGAA AGCCACTATG ATGAAAGTGT CTGATCCTAT TATGTTTGGT CACGCTGTGA AGGTATTCTT CAAGCCAGTG TTTGACAAGC ATGCGGCGCT TTTTGCTGAA TTAGGCGTAG ATGTTAACAA CGGTTTTGGT GATGTTTATG CCAAAATAGC GACATTACCT GCCGATAGCC GCGCCGAAGT CGAAGCCGAT ATCGCCGCCG TTTACGCTGC ACGTCCCGCA TTGGCTATGG TTGATTCTGA CAAAGGTATC ACCAACTTAC ACGTGCCAAG CGACATCATT ATCGATGCGT CTATGCCTGC TGCGATTCGT TCATCTGGCC AAATGTGGGG ACCAGATGGT CAACTGCATG ACACTAAAGC TATGATCCCA GATCGTTGCT ATGCCGGTAT CTACCAAGAA ACGATTGCCT TCTGTAAAGA GCACGGCGCT TTTGATCCTA AAACCATGGG CAGCGTGCCA AACGTGGGCT TGATGGCGCA AAAAGCCGAA GAGTACGGCA GCCACGATAA GACCTTTGAA ATACCTGCTG ACGGTGTGGT CAACGTTGTC GATGCCAGTG GTAAGGTATT GATGAGCCAT AACGTGGAAG CGGGCGATAT CTGGAGAATG TGCCAAGTTA AAGACGCACC TATCCGTGAT TGGGTCAAAC TGGCCGTGCG CCGTGCCCGT TTAAGCAATA CACCTGCGGT ATTCTGGTTA GATAGCAAAC GTGCCCACGA TGCTCAAATC ATTGCAAAAG TGCAGCAATA TCTGCCAGAG CATGATACTG ATGGCTTAGA GATCAGCATT ATGTCTCCAG AAGAAGCGAC TCGCTTCTCG TTGGCTCGCA TCAAAGAAGG CAAAGATACC ATTTCAGTTA CGGGCAACGT TCTACGTGAC TACCTGACTG ACTTGTTCCC TATCCTAGAG CTGGGCACCA GTGCCAAAAT GCTATCAATC GTTCCGTTAA TGAACGGTGG TGGTCTATTT GAAACTGGCG CGGGCGGTAG TGCACCTAAG CACGTGCAAC AGGTTGAGAA AGAAGGTCAC TTACGTTGGG ACTCTCTGGG TGAATTCTTG GCTCTGGCTG CGTCTCTTGA GCATTTAAGC CAAACTGTCG GTAATCCAAA AACCCAAGTG TTAGCTGATA CCTTAGATCA AGCCATTGGC CAATTCTTAG ATAGCAACAA ATCGCCATCA AGAAGAGTCG GTGAGTTAGA CAACCGTGGC AGCCATTTCT ACTTAGCCAT GTACTGGGCA CAAGCCTTAG CCGCGCAAAC GGGCGATGAG CAGTTACAAG CCCACTTCAT TCCGTTAGCG CATGCGTTGG CGGCAAATGA GCAAGTGATT GTGGCTGAAT TAGCGACGGC ACAAGGTGCA CCAGTCGATT TAGGCGGTTA CTACCGTTTA GATGCGGCTA AGGCTGAAAA AGCCATGCGC CCAAGCGAGA CGTTAAACAA GCTGTTGATT GCTTAA
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Protein sequence | MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI IASFPEQLTE AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP HYPDEPKTDA EKSIKTRYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWATD SKSHVAHMTD GDFYGSEQSV TLSDAGSVNI VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER EIENAKAEDV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHAALFAE LGVDVNNGFG DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA FDPKTMGSVP NVGLMAQKAE EYGSHDKTFE IPADGVVNVV DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR LSNTPAVFWL DSKRAHDAQI IAKVQQYLPE HDTDGLEISI MSPEEATRFS LARIKEGKDT ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH LRWDSLGEFL ALAASLEHLS QTVGNPKTQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI VAELATAQGA PVDLGGYYRL DAAKAEKAMR PSETLNKLLI A
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