Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2544 |
Symbol | |
ID | 5754303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3007490 |
End bp | 3008677 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641288838 |
Product | aromatic amino acid transporter |
Protein accession | YP_001554972 |
Protein GI | 160875656 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.487399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00912111 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACACAGA ATAAAATTTT CGGCAGTCTG CTGCTTATCG CAGGCACCAC AATCGGCGCG GGTATGCTGG CTTTGCCTAT CGCTTCGGCG GGACTTGGTT TTGGTACGTC CTCCGCCATC ATGTTGATCC TATGGGCGCT AATGGCCTAC ACGGCACTGC TAATGGTGGA AATCCATCAA TTCGCCCCCA GCGATGCCAG CCTTAATCAC TTGGCGCAAC GCTTATTGGG CCGTAAGGGC CAGTTGATCG CCAATAGCGC CTTGATGTTT TTACTGTACG CCCTTTGCGC CGCCTACATT GCCGGTGGCG GTGAGCAAGT GAACCAAAAG CTGAGCACTT GGCTAGGGCT AAGTTTGCCA CCACAGGCGG GCGCGATCCT GTTTACCCTG CTGATTGGGG CGATTGTGGG CATGGGAACC CACTGTGTGG ACCTTATCAA TCGCGGTTTA TTTGCCCTTA AGCTATTGGC ATTATTGCTT ATGTTGGCCT TGTTACTGCC GCAGGTAGAA AGCCCACATT TGCTTGAACT TCCGCTCAAC CAAGGTTTAA TTATCACGGC TATTCCGGTG ATTTTTACTT CCTTTGGTTT CCACGGTTCG ATTCCATCAG TGGTGCGCTA CTTAGGCGTT GAGGTCAAAG CCCTGCGCAG GATCATGCTG CTCGGCTCGG CCTTACCTCT GGTCATTTAT CTTTTGTGGC AAGTAGGTAG CCAAGGCGTA TTGAGCCAAA GCCAATTGCT CGAAAACCAA AGTTTATCGA GCTTTATCAG TCAACTAGCA AGCGTACTAC ACAGCGAATA CTTAAGCAGC GCGATCAGTC TATTTGCCGA TCTCGCCCTT GCGACTTCGT TTTTAGGGGT GAGTTTAGGT TTGTTCGATT TTATGGCCTC GACCTTAAGG CGTGAGGATG ATTTTTCTGG TCGTAGCCTA ACCGCTGCCA TCACCTTTTT ACCGCCCTTA GGTTTTGCCC TCTTCTACCC CCAAGGTTTT ATCACTGCCC TAGGTTACGC AGCGATTGCG CTGGTGATCC TCGCCATCTT TTTACCTGTG GCCATGGTGT GGACACAGCG CCAGACGCGA GATGCGGCCA ATATGCCGAC GGGATATCGG GTCGCGGGCG GTAAGTTTGC CTTAATGCTC GCCACACTTT GCGGAATCGT GGTTATCGCC GCGCAGATGT TTAGCTAG
|
Protein sequence | MTQNKIFGSL LLIAGTTIGA GMLALPIASA GLGFGTSSAI MLILWALMAY TALLMVEIHQ FAPSDASLNH LAQRLLGRKG QLIANSALMF LLYALCAAYI AGGGEQVNQK LSTWLGLSLP PQAGAILFTL LIGAIVGMGT HCVDLINRGL FALKLLALLL MLALLLPQVE SPHLLELPLN QGLIITAIPV IFTSFGFHGS IPSVVRYLGV EVKALRRIML LGSALPLVIY LLWQVGSQGV LSQSQLLENQ SLSSFISQLA SVLHSEYLSS AISLFADLAL ATSFLGVSLG LFDFMASTLR REDDFSGRSL TAAITFLPPL GFALFYPQGF ITALGYAAIA LVILAIFLPV AMVWTQRQTR DAANMPTGYR VAGGKFALML ATLCGIVVIA AQMFS
|
| |