Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2531 |
Symbol | |
ID | 5754290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2991127 |
End bp | 2993169 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641288825 |
Product | TonB-dependent receptor |
Protein accession | YP_001554959 |
Protein GI | 160875643 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.276329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACTATT TAAGAATAAT TATCATTCGC CGAAATTATC CAAGGAAGAA TGATATGTCC CGCTTTATCC GCCGTACTCG CAAAACAAGT CATACATCCG GTGCAACTCT GTCTCCTAAA CTGAGCCTGC TATCGCGCGC CATTGGCTTA AGCCTGTTGT TACCCGCTGC ATGGGCAACT GCCGCAGCTC CCCAAGATGC CACGCCAGAA ATGGAACGTA TGGTGATCAC AGCTACGCAA ACTCAGCATT CTGAACTGTC GGCGCCCGCT TCTGTGTCTG TGATAAATCG CAGTGAACTC GAAGCGCTAG TCATAGACGA TCTGGCCAGT GCAGTGCGTT ATTTACAGGG CGTGAATATC AGTGAAGGCA CGCCCTATGG TCGCAATGAA ATTAGTCTGC GCGGACTGGA TTCTGACTAC ACGCTGATCT TAATCAACGG TCGCCGAGTC AACTCCCGCG AAGCACTAAC CTCCGGTTAT GGCAACGATT TTGACTTATC ATCCATTCCC ATGTCTGCCA TTGAACGTAT CGAAGTCGTG CGCGGGCCTA TGTCATCCCT GTATGGCTCC GAAGCTTTAG GTGGCGTGGT TAACGTGATT TTGCGCCAAC CCACTGACGA CTGGCAGACC AGTGTCGGCG TACAATACGA TACGCCCACC AGCGGCAAAG GCGGCAACAG CACTAAGTAC AACTTCTACA CCAGCGGCGC GCTGATCAAA GATAAATTAC TGGCAAACTT AATCGTCGAC AGCAATCAAC GCGATGCATG GCGTTCAGAC TTAAAACCCA CCATTGATGC GCTAGAAGAC AGAGATGAAA TCAGCGCCCT CGCTAACCTG CAATGGTTGA TTGATAGCCA GCAAGATCTG CAATTTGATT TAAGTTACGC CAACGACGAA CGCGAATCGG ATTGGAATAA CTACGGCACA ATTCTCACCA ATAACCAACG AGCCGAGCGG ATAAGCTCAG GTCTAACCCA CAATGGCCAC TGGAACTGGG GCGATACTCG CCTGCGCTAT TACTATGAAA ATGTTGAGGT AACTGACGAC TCGGCGCTGA TCGCCGAGAT TGGGCATATC ACCCAAACCA ACCACAATCT CGACGGCCAA ACCACAGTAC TACTTGGGGA TCACATGTTA ACCAGCGGCG CGGAATACCG TTGGACTCAG CTTGAAAACA GCCGCAATAT TTTGGGTGAT GGCACCTTAG ACGACAGCCA GTCGGCCTTG TATCTGCAAG ATGAATTTAG CTTAGGCGAA CTCAATATCA CCTTAGGGGG GCGCGTCGAT CACCACGATG TGTACGGCAC CGAATTTAGC CCACGCGTGT ATTTGGTGTA TAACTTAAGC TCTGAATGGG TGATCAAAGG TGGCGGTGGC AAGGCATTTA AAGCGCCAAA TATGTCGCAA TCCCAAGCCG ATTATATTAT CCCCGCTTGT CGCGGCGCCT GCACCGTTGC GGGGAATCCC GATCTACAGC CCGAAACCTC AGTGAACTAC GAGTTATCGA CCCAATATCA AACCACGGAT TTTGGTGGCT CAATCACCTA CTTCCACAAC GATGTGGAAA ATAAAATCAT CACAGAAACC TGGGATAGAA CGCCCGGCGC AGTGTTGACT TATCAAAACG TGAACGAAGC CAAGATCACA GGTTGGGAAC TGCAGGCTTG GTACGATGTA ACCGACACGG TCAGCTTTAG CGGTAATTAC AGTAAAACCG ATGCCGAAGA TAAGCAAAAT GGCGCGCCTT TTACCCTAAC GCCGGATGAC AGCTACAACC TGAAACTGCA ATGGCAGGCA TTGGATGGCT TATCCACCTT TATCGCCTAC CACTATACTG GCGATCAGTA TTTGCGCACC AATGTAAAAT CGACGGGTTA TGGTTCACTC GACCTAGGCG CGAATTACCA AATTAATCCT ATGTTCAGAG TCAAACTCGG CGTCACTAAC CTAACGGATG CTGAGCGCGA CCAAGTGGCT ACCGATCTTG ATTACATTCA AAAGAGCCGC AGTATTTATG CGGGCGTGAC GGCAAGTTTC TAA
|
Protein sequence | MHYLRIIIIR RNYPRKNDMS RFIRRTRKTS HTSGATLSPK LSLLSRAIGL SLLLPAAWAT AAAPQDATPE MERMVITATQ TQHSELSAPA SVSVINRSEL EALVIDDLAS AVRYLQGVNI SEGTPYGRNE ISLRGLDSDY TLILINGRRV NSREALTSGY GNDFDLSSIP MSAIERIEVV RGPMSSLYGS EALGGVVNVI LRQPTDDWQT SVGVQYDTPT SGKGGNSTKY NFYTSGALIK DKLLANLIVD SNQRDAWRSD LKPTIDALED RDEISALANL QWLIDSQQDL QFDLSYANDE RESDWNNYGT ILTNNQRAER ISSGLTHNGH WNWGDTRLRY YYENVEVTDD SALIAEIGHI TQTNHNLDGQ TTVLLGDHML TSGAEYRWTQ LENSRNILGD GTLDDSQSAL YLQDEFSLGE LNITLGGRVD HHDVYGTEFS PRVYLVYNLS SEWVIKGGGG KAFKAPNMSQ SQADYIIPAC RGACTVAGNP DLQPETSVNY ELSTQYQTTD FGGSITYFHN DVENKIITET WDRTPGAVLT YQNVNEAKIT GWELQAWYDV TDTVSFSGNY SKTDAEDKQN GAPFTLTPDD SYNLKLQWQA LDGLSTFIAY HYTGDQYLRT NVKSTGYGSL DLGANYQINP MFRVKLGVTN LTDAERDQVA TDLDYIQKSR SIYAGVTASF
|
| |