| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2527 |
|---|
| Symbol | |
|---|
| ID | 5754286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2986671 |
|---|
| End bp | 2987549 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641288821 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001554955 |
|---|
| Protein GI | 160875639 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.618648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCTCT GGGATGGCAT TTCTGAGTTT GTCGCAGTGG CCGAAGCCGA AAGCTTTACC
TTAGCGGCGC AGCGACTGAA TATCTCCACC GCCCACGTGA GCCGCCAAGT CAGCGCCTTA
GAGAATCGCC TCGGCACTAA GCTGTTTTAT CGCACCACCC GCAAAGTGTC GCTAACCGAA
GAAGGCACGA TTTACTATCG CCATTGCCGC CAATTACAAA CCGGCTTAGA AGAAGCTGAG
CGCGCCATCT CAAACCTAAA GGACTCACCC CAAGGCTTAG TCAAACTCAC GGCTCCCGTG
GCCTATGGCG AGAAATTTAT CATGCCGTTA CTCAATGATT TTATGGTGCA ATATCCCAGC
GTTGAATTTA GCGTCGACTT GACCAATCGC ACCTTGGACT TGATTGAAGG CGGTTATGAT
CTGGCCATTC GCCTCGGAAA ACTCGCCGAT TCGAGCCTTA TGGCCAAACC GCTCAGCAGC
CGTACTCACT ATGTCGCCGC CTCACCAAGT TATGTGGAAA AATACGGCCA GCCCCATACT
TTATCTGAAC TTAGCCAGCA CAATTGTTTG ATCGGTAATC ATAATTACTG GCGCTTTGTG
GAAAATGGCC GCGAGCGTAA TATCAAAGTC CGTGGCAATC TCAATTGTAA CAGCGGCTAC
GCATTAAGGG ATGCGGCACT AAAAGGCATA GGGATAGTTC AACTGCCTGA TTATTATATT
GAAGATGATA TAAATGCAGG ACATTTACTG TCCTTACTCG ACGGTCACCG CGAAGCCAAA
GAAGGCATTT GGGCGCTCTA TCCGCAAAAC CGCCATTTAT CGGCCAAGAT CCGCGTATTG
GTCGATTACC TCGCCGAAAA ACTCATCGAA CAGGACTAA
|
|---|
| Protein sequence | MYLWDGISEF VAVAEAESFT LAAQRLNIST AHVSRQVSAL ENRLGTKLFY RTTRKVSLTE
EGTIYYRHCR QLQTGLEEAE RAISNLKDSP QGLVKLTAPV AYGEKFIMPL LNDFMVQYPS
VEFSVDLTNR TLDLIEGGYD LAIRLGKLAD SSLMAKPLSS RTHYVAASPS YVEKYGQPHT
LSELSQHNCL IGNHNYWRFV ENGRERNIKV RGNLNCNSGY ALRDAALKGI GIVQLPDYYI
EDDINAGHLL SLLDGHREAK EGIWALYPQN RHLSAKIRVL VDYLAEKLIE QD
|
|---|
| |