Gene Sbal195_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_2503 
Symbol 
ID5754262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2954113 
End bp2954574 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content46% 
IMG OID641288797 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001554931 
Protein GI160875615 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000333652 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0233016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA CATCAAAAGG TCGTTATGCA GTAACCGCTA TGCTAGATGT GGCCATCCAC 
TCAGCATCGG GACCAGTTCC CTTAGCGGAC ATCTCTGAGA GACAAGGGAT TTCGCTTTCC
TATCTGGAAC AACTCTTCGC TAAGCTAAGA AAACACGGTT TAGTTGCCAG TGTACGTGGA
CCGGGCGGTG GTTATCGCTT AGGCCTAGAA GCCAATGATA TTTCAGTCGG CATGGTTGTC
CATGCTGTAG ACGAGTCTGT CGATGCGACT CGTTGCCAAG GACTTGGCAA TTGTCAGAGT
GGAACTCGCT GCTTAACCCA TTCACTTTGG GGCGATTTAA GCAAACAAAT TTCAGATTTT
TTAGATGGTA TCAGTCTTGC TGGCTTGATG CAGAAACGAG ACGTGCAATT TATCTCGCTT
AAGCAAGACA CTATGCAAAA GGAACAAAGA GTCAGTTTAT AA
 
Protein sequence
MKLTSKGRYA VTAMLDVAIH SASGPVPLAD ISERQGISLS YLEQLFAKLR KHGLVASVRG 
PGGGYRLGLE ANDISVGMVV HAVDESVDAT RCQGLGNCQS GTRCLTHSLW GDLSKQISDF
LDGISLAGLM QKRDVQFISL KQDTMQKEQR VSL