Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2423 |
Symbol | aspS |
ID | 5754182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2862680 |
End bp | 2864458 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641288717 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001554851 |
Protein GI | 160875535 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000667018 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.106149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TTGGACAAGA AGTTACCTTG GTAGGTTGGG TTAATCGTAG CCGTGATTTG GGTGGCGTTG TCTTTTTAGA TTTAAGAGAC AGAGAAGGTC TGATCCAAGT GGTCTATGAT CCAGACTTAC CTGAGGTGTT CAATGTCGCC AGCACGCTGC GCGCCGAATT TTGCGTTCAG GTTAAAGGCC TAGTTCGCGC CCGTCCTGAC AGCCAAGTCA ATGGTCAAAT GAAGACGGGT GAGATTGAAG TCTTAGGCCA AGCCTTGACT ATCATCAACG CTGCCGATCC ACTGCCATTG AGCATGGATA ACTACCAGAA TAACAGTGAA GAGCAACGTC TTAAGTATCG TTACTTAGAT TTACGTCGTC CAGAAATGGC GCAGCGATTA ATTTTCCGCG CTAAAGTGAC CAGTTCTGTG CGTCGTTTCC TCGACTCAAA CGGTTTCTTA GACATAGAAA CACCGATCCT GACCAAGGCA ACCCCAGAAG GTGCCCGCGA TTATTTAGTA CCAAGCCGGA CTTATAAAGG TCAGTTCTTT GCCTTGCCAC AATCGCCACA GCTGTTTAAA CAGCTGCTGA TGATGTCAGG CTTTGATCGT TACTACCAAA TCGTAAAATG CTTCCGTGAT GAAGACTTAC GTGCCGACCG TCAGCCAGAA TTTACCCAAA TCGATATCGA AACGTCTTTC ATGAGCTCTG AGCAAGTGAT GGCGAAAACC GAAGAGATGA TGCGTGGTCT GTTCCTTGAA ATGCTGAACG TCGATCTCGG CGAATTCCCA CGCATGACCT ACAACGAAGC GATGCGTCGT TTCGGTTCAG ATAAGCCAGA TTTACGTAAC CCATTAGAGT TGGTGGACAT TGCCGATTTA CTAAAAGAAG TCGAATTTGC GGTATTCTCA GGCCCTGCTA ACGATGAAGA AGGCCGTGTT GCTGCACTGC GTATTCCAGG CGGCGCTGCA CTGTCTCGTA AGCAAATAGA TGATTATACG AAGTTTGTTG GCATCTATGG TGCTAAAGGC TTAGCGTGGA TGAAGATTAA TGACCTAAGC CTTGGCTTAG AGGGCATTCA ATCACCTGTG CTGAAATTCT TAAACGAAAG CATAGTCAAT GAAATCGTGA GCCGCACGGC AGCGCAAACC GGTGACATTA TTCTGTTTGG TGCTGACCAA GCGACAGTGG TTGCCGAATC TATGGGCGCA CTGCGTCTTA AAGCGGGCGA AGATTTTAAC TTACTGCAAG GCGAATGGCG TCCACTGTGG GTGGTTGACT TCCCAATGTT TGAGAAAATC AACGGCAACT TCCACGCTGT TCACCATCCG TTCACCGCAC CGCGTGGCGT AACCGCAGCA GAACTTGAAG CTAACCCAGC TAATCGCGTT TCTGATGCCT ACGATATGGT ATTAAACGGC TGCGAATTAG GCGGTGGTTC AGTGCGTATC CACAACCAAG AAATGCAGTC TGCGGTATTC CGTATTCTGG GTATTACCGA CGAAGAAGCC AAAGAGAAGT TCGGCTTCCT GTTAGAAGCG CTGCGTTACG GTACTCCGCC ACATGCAGGT TTAGCGTTTG GTTTAGACCG CATCATCATG CTGATGACGG GCGCAAGCTC AATCCGCGAT GTGATGGCGT TCCCGAAAAC CACTACAGCC GCTTGCCCGC TGACTAACGC ACCAGGATTT GCAAATCCGC AGCAGTTAGC TGAACTTGGC ATTGCCGTGG TCGAGAAAGC CGTTAAAACG GAAGACTGA
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Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLIQVVYD PDLPEVFNVA STLRAEFCVQ VKGLVRARPD SQVNGQMKTG EIEVLGQALT IINAADPLPL SMDNYQNNSE EQRLKYRYLD LRRPEMAQRL IFRAKVTSSV RRFLDSNGFL DIETPILTKA TPEGARDYLV PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF MSSEQVMAKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDIADL LKEVEFAVFS GPANDEEGRV AALRIPGGAA LSRKQIDDYT KFVGIYGAKG LAWMKINDLS LGLEGIQSPV LKFLNESIVN EIVSRTAAQT GDIILFGADQ ATVVAESMGA LRLKAGEDFN LLQGEWRPLW VVDFPMFEKI NGNFHAVHHP FTAPRGVTAA ELEANPANRV SDAYDMVLNG CELGGGSVRI HNQEMQSAVF RILGITDEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG IAVVEKAVKT ED
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