Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2207 |
Symbol | |
ID | 5753963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2623093 |
End bp | 2624031 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288499 |
Product | protein of unknown function UPF0052 and CofD |
Protein accession | YP_001554636 |
Protein GI | 160875320 |
COG category | [S] Function unknown |
COG ID | [COG0391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00612561 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.259269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCATT TGATGTTAAA TCAATTTGAA CGTGTCGTCG CCATTGGCGG AGGCCATGGT TTAGGCCGAG TATTATCCTC ACTCGATTTT TTAGGCAGCC GTTTAACGGG TATTGTCGCG ACCACTGATA ATGGTGGCTC GACCGGTAGA CTCAGAGCAG AGCAGGACTG TATTGCTTGG GGCGATTTAC GCAACTGCCT ATCCCATCTG GCCAATCGCC CTTCCGTCGG CTCACAACTG TTCGAATACC GTTTCCAAGG TGAAACAGAG CTTAGCGGTC ATAATCTGGG TAATCTCATT TTACTGGCGC TTGATCAACT GTGCGTTCGT CCATTAGAAG CGGTTAATCT TATCCGTAAC TTACTCAAGA TTGAAACTCA GCTGATCCCT ATGTCTGAGC AACCCACACA CTTAGTGGCT CTGCAAGCCT GTGGTAGTAA AGTATTTGGC GAGATCAATG TCGACAGTAT GGATGAAGCA CCTATCGCGC TCTGCCTTGA GCCACAGGTC GATGCAACTT TTGAAGCCTG TGAGGCTGTA CGGCACGCAG ATTTAATCAT TTTAGGCCCT GGCAGCTTCT TAACCAGCAT TATGCCGCCG CTGCTATTAC CTAAGTTTGC AAAAAGCCTA GCCGCTACTA AAGCTCAAGT GATCTTTATC GATAACCTTG CAGAGGAAGC CTCACCCGCG GGTCGATTTA GTATTGAGCA ACGTATCGCT TGGTGCCATC AAGTGATTGG CAAGCCCATC ATTCACAAAG TGTTACGTCA TGGCGAACAA ACGCGTTTAG GACCACTCAT TAACTATTTT CCGTTGAAGA ATCGCCATAA CCCGAATTTA CATGATCAAG CGAACCTATT AGATGCATTA AGCGCCCTGC TGCGAATTAA ATCTGAGCTC ACGCTGCAAT CGCAGGAGCC TCTCGCGCTT AGCTGCTAA
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Protein sequence | MQHLMLNQFE RVVAIGGGHG LGRVLSSLDF LGSRLTGIVA TTDNGGSTGR LRAEQDCIAW GDLRNCLSHL ANRPSVGSQL FEYRFQGETE LSGHNLGNLI LLALDQLCVR PLEAVNLIRN LLKIETQLIP MSEQPTHLVA LQACGSKVFG EINVDSMDEA PIALCLEPQV DATFEACEAV RHADLIILGP GSFLTSIMPP LLLPKFAKSL AATKAQVIFI DNLAEEASPA GRFSIEQRIA WCHQVIGKPI IHKVLRHGEQ TRLGPLINYF PLKNRHNPNL HDQANLLDAL SALLRIKSEL TLQSQEPLAL SC
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