| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2113 |
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| Symbol | |
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| ID | 5753858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 2522727 |
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| End bp | 2524631 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641288394 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001554542 |
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| Protein GI | 160875226 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000494856 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGT CAAAATCATA TCCAATTTTT TTACTGCTTA TTTTCTTAGG TCTCTTTGCT
TGGGTGTATC AAAGCGAAAA CAGCCAATTG CAAGTCCAAC AGCAGCAAGA ACTCGATAGC
TTTAAATCTA GCTTAAGCCG CTACCAACAA TGGCAGGGTA ACGGTGTAGA ACTCTTTAAA
AAACTTTCTG AAAACTACTC ATTCCAGTTC TTCCAATATA TTGATGATAC CGACGGCCAA
CTGAGCCATA CCGAAGGAAG CTTAGACAGT CAACATCCCC ATCCTTTAGC GAGTTTATTT
TCCATCGAAC TCAGCCACAC ACAAAAATTG GCATCGGGTC GTTTACAGGT CAAGCTCAGT
GCAAACCAAG CCATTGATAC TGCAATTAGT AACACTCAAA AACTCGGTGT CATGTTGCTA
GTGACTTACC TTATTTTGCT ATTAGTGTTT ATTCTATTAA TGTCGAAACT CAGAGCTGCG
GTACGTTATG CTGCTGATTA TATTTCAAAA ATACCCGAGT TAGGCTTTTC TGCCGTCGCA
GCATCGAAAC TCACTGGCGA GCTCACCCCT ATTGGTATCT CACTCGAAGA ATGTCGCCTG
CAACTTAAAG CCCAAATCGA TAAGCTCAAT CAAGAAAATG AAAAACTGCA TAAAGCAGCC
TATCAAGACG CCGTCACAGG TTTTGGTAGT CGCCAACGTT TCACCCAAAA ATTAGAAACC
ATTAGTCATC CCGATATTCC TCAACTTGGG CTGATGGCAA TGGTTAAAGC GACTGAGCTG
ACCCTCATTA ACCAAAAACA AGGCCGTTCA GCGGGTGATG ATTATCTCGC AAGAGTCGCA
AATTGCATTC GTAAAGCCTG TAGCAAATAT CCAGATGCTG AGTGTTTTAG GGTATCAAGT
GCCGATTTTG CAGTGTTTAT TCCCGATGTC ATGCTAAAAG ATGCACCGAA ATTTTTGGAC
CAATTAAAAA TTTACCTCGA TGAATATCTG CAAATGACAA AAGCAGAATC CGTCGCCCAT
ATTGGCTTAG TTCCTTATAG TCAAGGGATT GACCCTGTAA ATTTACTGAC TATAGCCGAT
ACCGCGGTCA GCATAGCTCA GACCCTTGGC CCCAATAGCT ATCACATCCA AGAGAAACTC
AATGGGGATG AACAGTTTGG TGACGATCGT TGGAAGATGG CAATCCATGA TTTAGTGACA
CGCCAAGCAT TGAAATTCTA CCAGCAGCCT ATTCAGCCGT GTCGTACCGA TGTAGAGGTT
TACCGTGAGT TGTTGGCGCG CTTTTACAAT AGCGAAGGCA AGTTCTTACC TACCACCACT
GTGATTGCTA TGGCTGAACG TCACGGTATG AGTTCGGAAT TGGATAAACT GGTTGTGATC
AGTGCATTAA AGATACTTAA GGAAAACCCG ACTATTTCCG GTAACTTTGG TATCAATATC
AGCGCATTTT CAGCCCATCA AGACATGTTT GTCGCTTGGC TAAAAGACAT ACTAGGTAAG
CAAAAATACA TAGCATCGCG TTTAGTCTTT GAGATCAACG AGTCCGGCAT GCAGTCTAAC
TTAGGGGCGA GTTATAAGTT TGTCCGCGAA GTGCACAGTG TCGGTTCGCG AGTGTCGATT
GAGCGTTTTG GCATGAGCTT TACCTCCTTC AAATTCTTCA GCGAAGTGCG CCCCGACTAC
ATTAAGCTCG ATGGCAGCTA CACGTCTAAC ATCGATGAAG ACAGCAATAA TAAGTTCTTT
GTGCGTATGA TGGTGGATGT CGCCAGACGA ATTGGCATTC GGGTCATCGC AACCAGTGTC
GAACGCCAAG AAGAAAAATT AACCCTCGAA AAACTCTTAG TCGATGGATT GCAGGGCTAT
TACATCGCAC AACCCCAAGC CATGGCCATT ACAGATCAGA TTTAA
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| Protein sequence | MAMSKSYPIF LLLIFLGLFA WVYQSENSQL QVQQQQELDS FKSSLSRYQQ WQGNGVELFK
KLSENYSFQF FQYIDDTDGQ LSHTEGSLDS QHPHPLASLF SIELSHTQKL ASGRLQVKLS
ANQAIDTAIS NTQKLGVMLL VTYLILLLVF ILLMSKLRAA VRYAADYISK IPELGFSAVA
ASKLTGELTP IGISLEECRL QLKAQIDKLN QENEKLHKAA YQDAVTGFGS RQRFTQKLET
ISHPDIPQLG LMAMVKATEL TLINQKQGRS AGDDYLARVA NCIRKACSKY PDAECFRVSS
ADFAVFIPDV MLKDAPKFLD QLKIYLDEYL QMTKAESVAH IGLVPYSQGI DPVNLLTIAD
TAVSIAQTLG PNSYHIQEKL NGDEQFGDDR WKMAIHDLVT RQALKFYQQP IQPCRTDVEV
YRELLARFYN SEGKFLPTTT VIAMAERHGM SSELDKLVVI SALKILKENP TISGNFGINI
SAFSAHQDMF VAWLKDILGK QKYIASRLVF EINESGMQSN LGASYKFVRE VHSVGSRVSI
ERFGMSFTSF KFFSEVRPDY IKLDGSYTSN IDEDSNNKFF VRMMVDVARR IGIRVIATSV
ERQEEKLTLE KLLVDGLQGY YIAQPQAMAI TDQI
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