| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2063 |
|---|
| Symbol | |
|---|
| ID | 5753807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 2452746 |
|---|
| End bp | 2453474 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641288344 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_001554493 |
|---|
| Protein GI | 160875177 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000471549 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000117497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA TCTCTAACGC TAGCCGTCAG GTTATTTTGG ATACCGAAAC CACAGGTATG
AACCAGGGCA GCGGCGCCAT TTATTTAGGC CATAGGATCA TCGAGATTGG TTGTGTGGAA
GTGGTGAACC GCCGTTTGAC GGGGCGTTAT TACCACCAAT ATATCAATCC AGGTCAAGCC
ATCGATCCTG AAGCCATTGC CGTTCACGGT ATTACCGATG AGCGCGTTTC CAAAGAGCCG
CGTTTTCATC AAGTTGCTCA AGACTTTATC AACTTTATCG ACGGCGCTGA AATCGTCGCC
CATAACGCGA ACTTCGACGT GAGCTTCATG GATCATGAGT TTTCACTGTT GCAGCCGCGT
GGACCAAAAA CCGCTGATAT TTGTCAGATC CTCGATACCT TAGTCATCGC TAAGTTCCTG
CATCCTGGTC AGAAAAACAA CCTTGACGCC CTCTGTAAGC GTTATGGTGT GGATACGTCG
CGCCGCGAAT ATCACGGCGC TTTGCTCGAT GCCGAGATCC TCGCCGATGT TTATCTGATC
ATGACCGGCG GGCAGACAAA GTTTAATTTG TCCAACGAGG AAGCGGGGCA GGAAGCGGGG
GGGATTCAAC GTTTTGATCC GCAATCACTT AACCTTAAAG TGATCGGCGC ATCGGCCGAT
GAATTGACTA TGCATGAACA ACGCCTTGAT TTAGTCGCAA AATCAGGCAA ATGCCTCTGG
AGAGGATAG
|
|---|
| Protein sequence | MNIISNASRQ VILDTETTGM NQGSGAIYLG HRIIEIGCVE VVNRRLTGRY YHQYINPGQA
IDPEAIAVHG ITDERVSKEP RFHQVAQDFI NFIDGAEIVA HNANFDVSFM DHEFSLLQPR
GPKTADICQI LDTLVIAKFL HPGQKNNLDA LCKRYGVDTS RREYHGALLD AEILADVYLI
MTGGQTKFNL SNEEAGQEAG GIQRFDPQSL NLKVIGASAD ELTMHEQRLD LVAKSGKCLW
RG
|
|---|
| |