| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1958 |
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| Symbol | |
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| ID | 5753702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 2343174 |
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| End bp | 2344469 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641288240 |
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| Product | integrase family protein |
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| Protein accession | YP_001554389 |
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| Protein GI | 160875073 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00797743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0944215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT TACCAAAGGG AGTTGAAAAA CTCCCTGTTG GGGTTGAAAT CAATTTTAAT
ACCGTTCGTA TAGTATTTAT GTTCAATGGC AAGCGCTACA GAGAACCATT AAAGGGTTAC
TCAAAGATTA CAAAGTCAGT CATTAAATAT GCCGAAAATA AGCGAAATAC TATCCTAACT
GAAATTGCTG AAAATCGATT CGACTACATA GCACACTTCC CTGAATCGAT TAAAGCGATG
GAATTTGCAG GTATTTTAAT TGAGCGCCGT AACGTTGCAA ATGGTGTAAA CCACTGGCTG
AAAATTCAAG ATGTGACCAA AGCAAAGAGC ACATCAAAAA ACTATCGTAG TAAGTCGAAG
CACGTTATTA ACTATTTTGG GGGTGATCAG CTAATTTCTG AAATTAGTCG AAGTCACCTA
CTGATGTTTC AAGCAAACAT GCTTAAAGCA GGCCTTTCTC CAAAGACAGT TAATGATGTG
TTCACGATTG TTCGTGGTGT TTGGTATGTT GCATTTGAAG ATGGGATCAT CAGATCTAAT
CCGCTCGATA GAATAAGTAA CATTGAGCGC GATACACTTG AAGAAACTGC AGACCCATTT
ACTCGTGACG AACTTGAAAG AATTGCGGCA GACGATACAA GTCGCCGCGG TGACATCAAT
ATGATCATGT TCTGCTGCTG GACAGGTCTG TCATTATCAG AGGTGATTGC GCTTGCATGG
GAGGATATTG ATACCGTTAA TTGGACAGTA AACATTCGAC GGGCCAGAGT GCTAACTCAA
TACAAAGTCC CAAAAGAACG TGGGCGAGTA AGAGTTATTG AGCTTATCGA TCCAGCAAAA
GAATGGCTTA TTGAGCAGAT GCAGCACACG ATGATGCTTC CAACTATCGA ATTAGAAGTG
AAGCAACGCG ACAATATCAC CACCAAAAAT GAAAATATTC GGTTTGTATT TTTAAACGGT
AAGAGCGGAT TACCTTGGTA TGATCATTCG GTTCGTCGTT GGTTTACTGG CATTTTAGAA
CGCACCAAGT TACGCCATCG TGGACCGAAT CAATGTCGCC ACACCTTTGC AAGTCAGCTG
CTTTCTAACT ACGTACCACT TGAATGGGTT GCAAGACAAT TAGGCCATAG TGATACCACA
ATGATTAAAA AACATTATGG CAAATGGATA CCTAAGGACT CGCAAAAAAT GGCTAATCGA
GTGTCAGAAA TGCTTGGTTT TACCAAGGAC ACAGAAGGAG AACAAAACGG CGATTTTGCC
CAGCTTTTGC CCAGATGCAA CAAGGGGAAT CAGTAA
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| Protein sequence | MSNLPKGVEK LPVGVEINFN TVRIVFMFNG KRYREPLKGY SKITKSVIKY AENKRNTILT
EIAENRFDYI AHFPESIKAM EFAGILIERR NVANGVNHWL KIQDVTKAKS TSKNYRSKSK
HVINYFGGDQ LISEISRSHL LMFQANMLKA GLSPKTVNDV FTIVRGVWYV AFEDGIIRSN
PLDRISNIER DTLEETADPF TRDELERIAA DDTSRRGDIN MIMFCCWTGL SLSEVIALAW
EDIDTVNWTV NIRRARVLTQ YKVPKERGRV RVIELIDPAK EWLIEQMQHT MMLPTIELEV
KQRDNITTKN ENIRFVFLNG KSGLPWYDHS VRRWFTGILE RTKLRHRGPN QCRHTFASQL
LSNYVPLEWV ARQLGHSDTT MIKKHYGKWI PKDSQKMANR VSEMLGFTKD TEGEQNGDFA
QLLPRCNKGN Q
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