Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1922 |
Symbol | |
ID | 5753665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2293416 |
End bp | 2294552 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641288203 |
Product | hydrogenase (NiFe) small subunit HydA |
Protein accession | YP_001554353 |
Protein GI | 160875037 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.102833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACAC ATGCAGCCCT ATATGAACAG GGAAAGGCGC GCTTAGATGC GTTACGCCAA TTCGCTCCCC GTCAACAACA ATCGCTGATT GAGAAAATGC AACAGCACGG CATTAGCCGC CGTGATTTTA TGAAGTGGAG TGCCATGGTG ACGAGCATGC TCGCATTGCC GCTCCCCTTT AGTAACTTAG TAGCCGAAGC TGCCGAATTA GCCGACCGTG TACCCTTAAT CTGGTTACAC ATGGCCGAAT GTACTGGCTG CTCAGAATCC TTAATTCGTA CTGATACCCC CAATCTAGAT TCGCTGATTT TTGACCATAT CTCCTTGGAA TATCACGAAA CCTTAATGGC TGCTGCGGGT TGGCAAGCCG AAGAGAACCT CGAAAATGCA CTCGAAACCT ACAAGGGCCG CTATTTACTG GCCGTTGAAG GGGCGATTCC AACCGCCAAT AACGGCAGCT TCCTCACTGT GGGCTGTAAA GGCCACACAG GATTAGAAAT CATCAAGCAT GCTGCAGAAG GCGCCGCCGC GATTATCTCT GTCGGCACTT GTGCGGCGTT TGGTGGTGTG CAAGCCGCCT ATCCAAACCC AACGGGGGCG AAAGGCGTGC ACGAAGTGGT CAGTAAACCC GTCATTAACT TAGGCGGTTG CCCACCGAGC GAAAAGAACA TAGTCGGCAC TTTGATGTAC TTCATCATGT TCGGCAAATT ACCTGCGCTG GATATGTTTA ACAGACCAAA ATGGGCTTAC GGCGCACGGG TACACGATAA CTGTGAACGT CGCGGCCGCT TTGATGCCGG TGAATTCGTT GAAGAATTTG GCGATCACGG CGCGAAAGAA GGCTACTGCC TGTATAAAGT CGGTTGTAAA GGTCCTTACA CCTACAACAA CTGCCCTACC GAGCGCTTTA ACCATCACAC CAGCTGGCCA GTACTTGCTG GACACGGTTG TATGGGCTGC TCAGAACCTA ACTTCTGGGA TGACATGGCC GACTTTGAAA AACCCCTTGG CCGTCAACTC CTCCATGGAT TGGATGCGAC CGCAGATACT ATTGGTGCGG TGATTTTAGG CGCGACTGTT GTGGGCATTG GAGCCCATGC CGTTGCCAGT ATTTTTGCCA AACCGCTGGA GGAATAA
|
Protein sequence | MDTHAALYEQ GKARLDALRQ FAPRQQQSLI EKMQQHGISR RDFMKWSAMV TSMLALPLPF SNLVAEAAEL ADRVPLIWLH MAECTGCSES LIRTDTPNLD SLIFDHISLE YHETLMAAAG WQAEENLENA LETYKGRYLL AVEGAIPTAN NGSFLTVGCK GHTGLEIIKH AAEGAAAIIS VGTCAAFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGKLPAL DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT IGAVILGATV VGIGAHAVAS IFAKPLEE
|
| |