| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1889 |
|---|
| Symbol | rbgA |
|---|
| ID | 5753632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 2258008 |
|---|
| End bp | 2258949 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641288170 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_001554320 |
|---|
| Protein GI | 160875004 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTC AGTGGTATCC AGGGCATATG CACAAGGCAC GCAAAGAGAT TGAAGAGGCA
ATGCCTCAGG TCGATCTTGT TATCGAAGTG CTGGACGCGC GTATTCCCTA CAGTAGCGAA
AACCCCATGG TGGCTCAGCT TCGAGGCGAC AAACCTTGTA TCAAACTGCT CAATAAATCT
GATCTGGCCG ATCCAGAGAT CACTGCGCAA TGGATTGAAT ACTTAGAACG CGAACAAGGC
GTAAAAGCCA CAGCGATCAC CACACTGCAA GCGGCAATGG TGAAAAAGAT CCCTGATATC
TGCCGCAAGC TAGTGCCAAG TCGTGATAAA ACCGAAAAAG ACATACGCAC TATGATCATG
GGGATCCCCA ACGTAGGAAA ATCCACCATC ATCAATACCT TAGCAGGCCG TGTTATCGCC
AAAACAGGTA ACGAACCTGC GGTGACCAAA ACCCAGCAAA GGATCAATTT ACGTAACGGT
ATCGTACTCT CGGACACCCC AGGAATTTTG TGGCCCAAAG TGGATAACGA AGCCAGCAGC
TATCGCCTCG CCGTCACTGG TGCCATTAAA GATACCGCAA TGGAATATGA AGATGTAGCC
CTGTTCGCCG CTAAGTATTT CTTAACCGCT TATCCAAAAG AGATTTGTGA GCGCTACAAT
CTCACTGAAT TACCAAAGGA TGATGTGGCT TTACTCGAAG CGATTGGCCG TAAACGTGGC
GCCCTGCGTC CCGGTGGTCG CATTGATATG CACAAGGCAT CTGAGTTATT GCTGCATGAA
TACCGCTCAG GCAAAATCGG CCTCCTTTCG TTAGAAACGC CAGCGATGGC CGAGCTTGAG
AAGATTGAAG TCGCCCGCAT CATGGCCATA AAAGAAGCCG AGAAAGAAGC CAAACTGGCT
AATGAAAAGC TGAAACGTTC AGGCAAACGC CATAACGACT AA
|
|---|
| Protein sequence | MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMVAQLRGD KPCIKLLNKS
DLADPEITAQ WIEYLEREQG VKATAITTLQ AAMVKKIPDI CRKLVPSRDK TEKDIRTMIM
GIPNVGKSTI INTLAGRVIA KTGNEPAVTK TQQRINLRNG IVLSDTPGIL WPKVDNEASS
YRLAVTGAIK DTAMEYEDVA LFAAKYFLTA YPKEICERYN LTELPKDDVA LLEAIGRKRG
ALRPGGRIDM HKASELLLHE YRSGKIGLLS LETPAMAELE KIEVARIMAI KEAEKEAKLA
NEKLKRSGKR HND
|
|---|
| |