Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1835 |
Symbol | |
ID | 5753578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2200186 |
End bp | 2200713 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641288116 |
Product | thioesterase superfamily protein |
Protein accession | YP_001554266 |
Protein GI | 160874950 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.651387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCA ATTCGGATTT TTTCCCGCTG ACCCAAATGG CGCAGCGGTT TGTGGATCAA CTCGCCCAGT GTCGCCGTCT CGGTTTAACC GTATTGGAGG CGAGTGAGCA CCATGTGTTG ATTGAGTTGC CCTACAGCAC TGAATTAATT GGTTATCCCG ATACGGGCGT TATCCATGGT GGAGTGATCA CTACCTTAAT GGATACTGCC TGTGGCAGTG CAGTGGTCAG TGCAATTTTC CATAAATTCA AATTGTTAGA AATCTCACCC ACGCTCGATT TGCGGGTGGA TTACATGAAG CCCGCTCAGC CCCATAAACC TGTGTTTGGA TTTGCGGAAT GCTACAAGTT GTCCTCCAAT ATTGCCTTTA CCCGCGCGAT TGCTTATCAA GACAGCATAG ATGATCCCAT TGCCCATGCT GTTGGTTCCT TTATGCGGAT CAGCCCGGAA ATGGTCGGTG ATGCCTTTAG ACAAGCGTTG ATGGGTGAAG CTGTGCCTGA GATAGGAGAT ACTGATGAGC GCAAATAA
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Protein sequence | MKVNSDFFPL TQMAQRFVDQ LAQCRRLGLT VLEASEHHVL IELPYSTELI GYPDTGVIHG GVITTLMDTA CGSAVVSAIF HKFKLLEISP TLDLRVDYMK PAQPHKPVFG FAECYKLSSN IAFTRAIAYQ DSIDDPIAHA VGSFMRISPE MVGDAFRQAL MGEAVPEIGD TDERK
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