Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1696 |
Symbol | |
ID | 5753432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 2043726 |
End bp | 2045423 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287972 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_001554129 |
Protein GI | 160874813 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0311025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTGA TCCTATTATT GACCCAACAG ATGTCGCTGT ACTTAGTGAT CGTTTACTTA GTCAGTAAAA CGCCGCTGTT TAAACTGTTT GCCGAAACCT CCCCGCGTCT GCCACATAAG ATTTTTATGT ATCTGATTTT TTCAAGTTTC TGCATCATGG CCACCTATTT TGGTGAGCAA ACATCAGGCG CGATTGCCAA CACCCGTGCT ATGGGCGCTG TGTTAGGTGG ATTATTAGGC GGGCCCGTTA CTGGTTTTCT GGTAGGACTA ACAGGTGGCC TTCACCGCTA CAGTATGGGC GGCTTTACTG AAATAGCCTG CGCTATTTCC ACCACCTTAG AAGGATTATC CGCAGGAATG ATAAGCTTCT ACTTAAGACG TGCGGGTAAA AGTGAGCTTA TCTACAATCC ATTACTCGTT TGCCTAGTGA CTTTTTATGC CGAAATGATG CAAATGAGCA TCATCTTACT GGTCGCCCGC CCCTTCGATG ATGCGTGGGA ATTAGTGCGC CAAATCGCGC CGCCCATGTT GTTAGTCAAT TCCGTAGGAG CGGCACTCTT TATGAGCATG ATCCGCGACC AAAAAACTAT GTTCGATAAA CTTTCCTCCA GTTTTTCAAC TAAAGCATTA AAGATAGCCG AACGCAGTGT CGGACTCCTA TCCAAAGGAT TTAACGAAGA AAGCAGCAGC CGTGTCGCCA AAATCGTCAT AGAAGAAACC AATGTGGGCG CAGTAGCCAT CACCGACAGG GAAAAACTGT TAGCTTTTAT TGGTATAGGT GCCGATCATC ATCTGCCTGG CACGCCGATT TCTTCCAAGA TCACCTTAGA GGCGATTAAT CAAAATAAAG TTATGTTCGC CGATGGCGTT GAAATGCCCT ATTCATGTTC TATTTCAAGT AATTGTCGTT TAGGATCGAG TCTGGTGATC CCACTGCGCA GTGATACCGA AGTCATTGGC ACCATTAAAC TCTACGAGCC GAAAAATAAG CTTTTTTTGA ATATTAACCG CACTTTAGGT GAAGGTATTG CCCGTCTGTT ATCCAACCAA ATACTTTATG GCCGATTTGA GCAACAACAA AATCTGCTGA CTCAAGCCGA ATTGAAATTA CTGCAAGCGC AGGTTAATCC ACACTTTCTG TTCAATGCTC TCAATACCAT TAGCGCGATT ATCAAGCGCG ATCCCGATAT GTCTAAGCAG TTGCTGCAGC AGTTATCACA ATTTTTACGG ATCAATTTAA AGCGAACTAC AGGCTTAGTG ACGCTTGGGG ATGAGCTAGA TCACATCGCG TCCTATCTCA CCATTGAAAA AGCGCGTTTT ATTGATAAAT TACAAGTCAG TATCGCGATA CCTGAATCAC TCTACCACTG CAAAGTACCG GCCTTTACCC TGCAGCCGAT TATTGAGAAT GCGGTAAAGC ACGGCACTTC GCACATGATA GAGCAAGGGC AGATCAAAGT GACGGGCAAG CTCGAAAATG ATGTGCTGGA ATTAGAAGTC ACAGACAATG CCGGATTATA TCAGCCCGTT GAGGGCTCTG AAGGCCTAGG GATGAACTTA GTGCATAAAC GCATTCAAAA TATTTTTGGC GAGCAATATG GTGTCACTGT GGAATGCGAA GCCGATGAAT TGACTCGTGT CACCATAAGA TTACCCATAG AAAACCCTGA GATATCCAAT ATGGACACCC GCACGTGA
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Protein sequence | MSLILLLTQQ MSLYLVIVYL VSKTPLFKLF AETSPRLPHK IFMYLIFSSF CIMATYFGEQ TSGAIANTRA MGAVLGGLLG GPVTGFLVGL TGGLHRYSMG GFTEIACAIS TTLEGLSAGM ISFYLRRAGK SELIYNPLLV CLVTFYAEMM QMSIILLVAR PFDDAWELVR QIAPPMLLVN SVGAALFMSM IRDQKTMFDK LSSSFSTKAL KIAERSVGLL SKGFNEESSS RVAKIVIEET NVGAVAITDR EKLLAFIGIG ADHHLPGTPI SSKITLEAIN QNKVMFADGV EMPYSCSISS NCRLGSSLVI PLRSDTEVIG TIKLYEPKNK LFLNINRTLG EGIARLLSNQ ILYGRFEQQQ NLLTQAELKL LQAQVNPHFL FNALNTISAI IKRDPDMSKQ LLQQLSQFLR INLKRTTGLV TLGDELDHIA SYLTIEKARF IDKLQVSIAI PESLYHCKVP AFTLQPIIEN AVKHGTSHMI EQGQIKVTGK LENDVLELEV TDNAGLYQPV EGSEGLGMNL VHKRIQNIFG EQYGVTVECE ADELTRVTIR LPIENPEISN MDTRT
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