Gene Sbal195_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1678 
Symbol 
ID5753414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2026023 
End bp2027324 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content42% 
IMG OID641287954 
Productpeptidase M23B 
Protein accessionYP_001554111 
Protein GI160874795 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0411923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.669465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGACAG GCAAACCCAA CTTTATCAAC TTATCGCAAA CCCGTTTGCA GAACTTATCA 
TCGACCCAAA AAAACATTCT ATTAATGGGT GGTTTGTTGA TTGGCGCTGC TATGTTAATG
CCGAATAATG GTCATGTTGT GCCAACTGCT CAGCGTATCC CTGTTGTCCT CGATATTGAA
AATATTCTCC CCCAAGTTTC TGAACCTGAA GTCCAAGATC AAGCAACCCT TATTAATAAC
GCTCCACAGT TTGAGCGAAT TATCGTTTCT GGTGATACCT TAAGTGGGTT ATTTTCGAAA
GCGGGTGTTG ATCAGCAGAC CATGTATAAG GTGTTAGAAG CTGATTTAAA TATTTTGGCA
CTTGATACCT TATTGCCTGG TAACAGAATG CAATTTTGGC TCGATAACGA AGGCCAATTA
CAGAAATTAG AACTTTATTT TAACGCCGCT CGCCAAGTGG TGTTTACACG TTATGAAGAC
GGCAGTTTTA ATGTTGAAGA AGTCAACGTT GAAGGCGTTT GGCAAAATCG TATTATATCT
GGCGATATTA AAGGCTCATT CTACGTCTCT GCACAAAAAA TGGGTTTAGC TGCGGCAGAC
ATTCAGCGGA TTGAAGATTT ACTCAAAGAA AAATTGAATT TCGCCCGTGA TTTACGCGTT
GGCGATAAAT TCTCTGTTTT GGTAAATGAT CAATATGTTG AAGGTGAAGC AACGGGCAGT
AGCCAAATTT TAGGCGTGAG TATTAAAACC GGTCGTTCTG AAATTAGTGC ATTTCAATAT
ACTGACGGCA GTTATTACGA TGCCAAGGGC CAGAGTTTAG TACGTGCGTT CCAGCGTTAT
CCATTAGCTA AACAACCCCG CATGAGTTCC CGTTTTAATC CATATCGTAA GCATCCTATT
ACTGGCCGTA TTTCACCCCA TAACGGAACC GACTTTTCAG TGCCTATCGG GACTAAAGTG
ATTGCTCCTG GTGATGGTGT TGTTAGTTTA GTGACTGACC ATCAGTTCGC TGGTAAGTAT
ATTGTGATTG ACCACGGTGG TAAGTACCGT ACCCGTTACC TGCATTTATC TAAGGCGCTT
GTGCGTAAAG GTCAGCGAGT GACTCGAGGC CAAGTGATTG CTTTATCAGG TAATACTGGT
CGCTCAACGG GTCCACACTT ACATTATGAA TTCCATATCA ATGGTAAACC TGTTGACCCG
TTGAAAGCGG ATATTCCTAT GTCTAGCAAG TTAGCGAATC AAGACTTACG CACATTTACC
AATATGGTGA AGAGTCGTGA AGCTATGATG AACCTTGGCT AA
 
Protein sequence
MQTGKPNFIN LSQTRLQNLS STQKNILLMG GLLIGAAMLM PNNGHVVPTA QRIPVVLDIE 
NILPQVSEPE VQDQATLINN APQFERIIVS GDTLSGLFSK AGVDQQTMYK VLEADLNILA
LDTLLPGNRM QFWLDNEGQL QKLELYFNAA RQVVFTRYED GSFNVEEVNV EGVWQNRIIS
GDIKGSFYVS AQKMGLAAAD IQRIEDLLKE KLNFARDLRV GDKFSVLVND QYVEGEATGS
SQILGVSIKT GRSEISAFQY TDGSYYDAKG QSLVRAFQRY PLAKQPRMSS RFNPYRKHPI
TGRISPHNGT DFSVPIGTKV IAPGDGVVSL VTDHQFAGKY IVIDHGGKYR TRYLHLSKAL
VRKGQRVTRG QVIALSGNTG RSTGPHLHYE FHINGKPVDP LKADIPMSSK LANQDLRTFT
NMVKSREAMM NLG